CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933903_ssr242 microsatellite CK933903_ssr242:242..253. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:3..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 78/253 (30.83%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +            +  +VT    IE+ +     ++G++DI+ NNAG T D +   + D    E+  I+  NL   F  +K   R M     G II+  SV G +G      YA++K GL+G  K+ A E+   GI VN V+P  + T + +    L+DD   G+ + +  G +   ++IA A  +L SDE+  ++G  L V+GG  +V
Sbjct:    4 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG------LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH-AYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            RL GKV ++T  A+GIG+  A  F++ GAKV+  DI     ES  +++               DVTK+K I+   N    +  +LD++FN AG V      +LD ++ +++  +++N+   +L  K     M     G+II+ +SV   + G      Y+++K  ++GL K+ A +  + GIR NCV P  V TP  ++ ++   +        LK    G     E+IA   +YL SDES  V+G+ +++DGG+++
Sbjct:    3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI----NESKLQELEKYPGIQTRV----LDVTKKKQIDQFAN----EVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.421e-24
Identity = 76/253 (30.04%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            L  K A++TG +RGIG   A   +K GA V++    ++   +   D             V  DV+  +D++N +   ++ +  +DI+ NNAG T D +   I+   + E++ +++INL G F  TK   R M     G II+ +S+ G+ G      Y ++K G++GL K++A EL    I VN ++P  +ST +     KLA D    M   +  A   EP D++    +L S+ ++ ++G  L +DGG  +
Sbjct:    2 LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVD--EIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNL---IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTD---KLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMVM 246          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.421e-24
Identity = 77/255 (30.20%), Postives = 129/255 (50.59%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 847
            +++  V ++TG +RGIG+  A    K G KVL+   +     E V K I               DV+KE D++  + TAV  +G +D++ NNAG   +    ++   +++++ ++ +NL G FL T+ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PED+A    +L  S  +  ++G    +DGG AI
Sbjct:   82 KVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITFGG---DVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 78/257 (30.35%), Postives = 135/257 (52.53%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH-AYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            RL GKV ++T  A+GIG  +A  F++ GAKV+  DI     ES  +++               DVTK++ I+       ++  ++D++FN AG V      ILD ++ +++  +++N+   FL  K     M     G+II+ +SV   I G      Y+++K  ++GL K+ A +  + GIR NCV P  V TP  ++ ++  D+    + + L     G     E++A   +YL SDES  V+G+ +++DGG+++
Sbjct:    3 RLDGKVIVLTAAAQGIGRASALAFAREGAKVIATDI----NESKLQELESYRGIQTRV----LDVTKKRQIDQ----FASEIERIDVLFNVAGFVHH--GTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARDNPKEALKTFLNRQKTGRFASAEEVALLCVYLASDESAYVTGNPVIIDGGWSL 245          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24
Identity = 76/255 (29.80%), Postives = 129/255 (50.59%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 847
            +++  V ++TG +RGIG+  A    K G KVL+   +     E V K I               DV+KE D++  + TAV ++G +D++ NNAG    ++       +++++ ++ +NL G FL ++ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PED+A    +L  S  +  ++G    +DGG AI
Sbjct:   11 KVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGG---DVSKEADVDAMMKTAVDKWGTIDVVVNNAGDTLLIRMK-----KSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24
Identity = 75/248 (30.24%), Postives = 124/248 (50.00%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            KV  + GG+RGIG+  ++L ++   KV +     ++ ++   ++            + CDV+KE +I++         G +D + N+AG   +    +L     +   +LS+NLVG     K A R M     G+I++  S+ G  G      Y +SK GL+G  K+ A E+ +  IRVN V+P  + T +    L L +D L  M     G   +PE++A++ L+L   ES  ++GH LVVDGG  +
Sbjct:    3 KVCAVFGGSRGIGKAVSKLLAQRDYKVAVISRDLEVAKAAAAEVGAHLA-------LSCDVSKENEIQDTFKEITNNLGNVDYLVNSAGIRRDAL--LLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMT---LGLEEDSLTKMVP--LGRFGDPEEVAQSVLFL--LESPYITGHVLVVDGGLQL 234          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24
Identity = 85/254 (33.46%), Postives = 138/254 (54.33%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAAR-VMKPAGRGSIISTASV--CGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++             V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V  +  +   +++ +++  NL GAFLG++ A +  ++   +G++I+ +SV    I      H YA+SK G+  + +  A+E    GIRVN + P  ++TP+  +  K AD        ++   G + EPE+IA A  +L S E+  V+G  L  DGG
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEE--EIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGMENPVSSH--EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVH-YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIA-AVAWLASSEASYVTGITLFADGG 250          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24
Identity = 81/260 (31.15%), Postives = 119/260 (45.77%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGS-IISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG-----GMYSNLK----GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TG  +GIG+  A    K G  V IAD  D   ++V  +I            V  DV+    +  AV  A    G  D++ NNAG      ++ + P I+D       ++ +IN+ G   G + A    K  G G  II+  S  G +G      Y+SSK  + GL +  A +L   GI VN   P +V TP+  +  +   +  G     G     K    G + EPED+A    YL S +S  ++G +L++DGG
Sbjct:    3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGRAMA---VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD-------KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24
Identity = 78/247 (31.58%), Postives = 121/247 (48.99%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV----GAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAV--ELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGA------VLEPEDIAEAALYLGSDES 799
            + GKVAL+TG A+GIG+  A     HGAKV + D   + G   CK             +V CDV  +K + +     V  +G+LDI+ NNAG           N++  +E+ L INLV    G +LG  + ++     G G II+ +S+ G++  A    Y +SKHG++G  ++ A+   L + G+R+N + P  V TP+ +   K  + G    Y +   A      VL P  IA   + L  D++
Sbjct:    3 VNGKVALVTGAAQGIGKAFAEALLLHGAKVALVDWNLEAGVK-CKAALDEQFEPQKTLFVQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEQTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVDTPILESIEKEENMGQYIEYKDQIKAMMKFYGVLHPSTIANGLINLIEDDA 237          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
FABG_ECOLI1.088e-2430.833-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
BDH2_HUMAN1.088e-2430.743-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
FABG_BACSU1.421e-2430.043-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG2_BRANA1.421e-2430.203-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
BDH2_MOUSE1.856e-2430.353-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]
FABG4_BRANA4.134e-2429.803-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
CBR4_XENTR4.134e-2430.24Carbonyl reductase family member 4 OS=Xenopus trop... [more]
DHGB_BACME5.399e-2433.46Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
BUDC_KLEPN5.399e-2431.15Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
PGDH_MOUSE7.051e-2431.5815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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