CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933903_ssr242 microsatellite CK933903_ssr242:242..253. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:3..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 78/250 (31.20%), Postives = 123/250 (49.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            KV  + GG+RGIG   ARL ++ G ++ I     +   +   D+            + CDV KE D++N         G+++ + N AG     + N+L     E     L  NL+G+ L  + A + M    RGSI++  SV G+ G +    Y++SK GL+G  +  A E+ +  IRVN V+P  + T + KD  +        +  N+  G   +  D+A+AA++L   ES  V+GH LVVDGG  +
Sbjct:    3 KVCAVFGGSRGIGRAVARLMAQRGYRLAIVARNLEGARAAAGDLGGDHLA------LSCDVAKEHDVQNTFEEIEKNLGRVNFLVNAAGIN---RDNLLVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMTKDLNEEL------LKKNIPLGRFGDALDVAQAAVFL--LESPYVTGHVLVVDGGLQL 235          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 73/254 (28.74%), Postives = 123/254 (48.43%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE---VKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            +LQGKV+L+TG  RGIG   A   +  G+ V+I     +  ++V ++I            V  ++  E+ I  A          +DI+ NNAG   +   ++ ++LD     +E +L +NL G FL T+++ R M     G I++ +SV G  G      Y+++K GL+G  K+ A EL    + VN V+P  + T    D   +  + +   Y      G    PE++A   L+L S+ +  ++G  + V+GG
Sbjct:    4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG--VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD-----WEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIET----DMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHSO_RHOSH (Sorbitol dehydrogenase OS=Rhodobacter sphaeroides GN=polS PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 81/265 (30.57%), Postives = 121/265 (45.66%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDF-LKLADDGLGGMYSNLK--------------GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL GK ALITG ARGIG   A  + + GA+V IADI  +   +   +I            +  DVT +  I+  V   + ++G +DI+ NNA   D     I++  +  ++R+ +IN+ G     +  AR M   GR G II+ AS  G  G A    Y ++K  ++ L ++  + L R GI VN ++P VV          K AD      Y NL               G +   ED+   A++L + E+  +      VDGG
Sbjct:    2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA------IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAP--IVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFAD------YENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG 252          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 77/249 (30.92%), Postives = 123/249 (49.40%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            L  KVAL+T    GIG   AR  ++ GA V+++  K    ++V + +              C V K +D E  V TAV  +G +DI+ +NA  V+    +++D  +  +++ L IN+    L TK     M+  G GS++  +S+           Y  SK  LLGL K  A+EL    IRVNC++P ++ T  ++  L +  +    M   L+   L EPED A    +L S+++  ++G  +VV GG
Sbjct:   12 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQ---QNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAA-VNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSR-MLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLG--------GMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            KVAL+TGGA+GIG   A    + G KV + D  ++  ++    +            +  DV+   D+ NAV     Q+G   +M NNAG       + +  +Q  F+ +  +N+ G   G + A    K     G II+  S  G+ G      Y S+K  + GL +  A +L   GI VN  +P +V TP+ +       +  G           S +  G V +PED++    +L   +S  ++G  ++VDGG
Sbjct:    5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIA---IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
CBR4_BOVIN2.962e-2231.20Carbonyl reductase family member 4 OS=Bos taurus G... [more]
FABG_AQUAE3.869e-2228.743-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
DHSO_RHOSH3.869e-2230.57Sorbitol dehydrogenase OS=Rhodobacter sphaeroides ... [more]
DHRS4_PONAB3.869e-2230.92Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
BUTA_STAAW3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAR3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAC3.869e-2227.84Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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