CK933910

Overview
NameCK933910
Unique NameCK933910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP_ENCHE (Aquaporin OS=Encephalitozoon hellem GN=AQP PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 49/182 (26.92%), Postives = 83/182 (45.60%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVA-CLLLKFVTNGQTTSAFALSSG---VGAWNAVVF--EIVMTFGLVYTVYATALDPKKGSLGT-----------------IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            +++  H NPA+T  A + G + +L G+ Y +AQ +G  +A C LL     G   +   +       GA N  VF  E  +T  LV+  +A A++P +  + T                  AP+ IG  +G     G    G + NP ++  P ++S +W + W+Y     +GG + G++  F
Sbjct:   62 DVTIAHFNPAITLAAILTGKMGILCGLGYMLAQCVGFILAVCALLVCSPVGYKETLNVIRPAPAPFGADNLNVFFTEFFLTAILVHIAFAVAVNPYRPKVDTDGKFVDPDEKEPVDRRITAPLCIGLTLGFLAFMGLVTSGGAFNPGLTLAPVIMSNTWQHFWLYLGAQYLGGLVGGLLQVF 243          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP9_RAT (Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 55/197 (27.92%), Postives = 84/197 (42.64%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLL--------------KFVTNGQTTSAFALSS----GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP----ALVSWSWDNH-------WVYWVGPLIGGGLAGIVYEFFFINQSHEQL 814
            ISGGH+NPAV+F     G +   +   Y  AQ LG+ V    +              K +  G+  +AF  ++     +    A V ++V T  L+  V+A       G    + P+ IG ++     + G   G +MNPA    P    AL  W ++         W+  VGP+IG  L G++Y   FI   H +L
Sbjct:   78 ISGGHINPAVSFAMCAFGRMEWFKFPFYVGAQFLGAFVGAATVFGIYYDGLMAFAGGKLLVVGENATAFIFATYPAPFISTPGAFVDQVVSTMFLLLIVFAMFDSRNLGVPRGLEPVVIGLLIIVLSCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTVGNNFWWIPVVGPMIGAFLGGLIY-ILFIQMHHSKL 273          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: GLPF_STRPN (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae GN=glpF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 62/234 (26.50%), Postives = 99/234 (42.31%), Query Frame = 2
Query:  152 EFISTLIFVFAGEG--SGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL--LKFVTN-------GQTTSAFALSSGV-GAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV----------SWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            EF+ TLI +  G G  +G+   K   N     S                      +S  ++NPAVT G  + G +     + Y +AQ  G+ +  +L  L+F  +       G   + F+    +    + ++ EI+ TF LV T++A  L   +  +GT A   +  IVG  +  GG   G ++NPA   GP ++             W   W+  VGP+IG  LA +V+  F
Sbjct:    8 EFLGTLILILLGNGVVAGVVLPKTKSNS----SGWIVITMGWGIAVAVAVFVSGKLSPAYLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILATFSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAGIGTFAVGTL--IVGIGLSLGGT-TGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALAVLVFSLF 234          
The following BLAST results are available for this feature:
BLAST of CK933910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP_ENCHE3.219e-1126.92Aquaporin OS=Encephalitozoon hellem GN=AQP PE=3 SV... [more]
AQP9_RAT4.204e-1127.92Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1[more]
GLPF_STRPN7.171e-1126.50Glycerol uptake facilitator protein OS=Streptococc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933910 ID=CK933910; Name=CK933910; organism=Citrus sinensis; type=EST; length=879bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGT
TCAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGT
CGCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCT
ATGTNAGTTTGCACGGATGTTGTATTTAA
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