CK933910

Overview
NameCK933910
Unique NameCK933910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 81/243 (33.33%), Postives = 121/243 (49.79%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            E T     RA +AEF++TL+F++    + + +   +  GAN                               +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +W +HW++WVGPLIG  +A   +++
Sbjct:   34 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            NISGGH NPAV+    + G +  +  I YW++QL G  +   L K V+  +     + +AFA+         A+  EIVMT  LV  V   A++ K  ++G +AP +IGF V  +ILAGG   GA MNPA +FGPA+++  WD HW+YW+GPL+ G   G++   F
Sbjct:   87 NISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLLIRLF 250          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.185e-27
Identity = 79/239 (33.05%), Postives = 118/239 (49.37%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX----NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            E T     RA +AEF++TL+F++    + + +   +   A                              ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+      +K   +         A +L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:   29 ELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 266          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.185e-27
Identity = 68/166 (40.96%), Postives = 99/166 (59.64%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVG-AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            NISGGH NPAV+  A + G ++L+  + YW++QLLG  +   L K V+  +     + +AF      G    A+V EI++T  L   V   A++ K  + G +AP +IGF V  +ILAGG   G  MNPA +FGPA+V+  W+ HW+YW+GPL+ G L G++   F
Sbjct:   85 NISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK--TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLLIRCF 248          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 79/239 (33.05%), Postives = 118/239 (49.37%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX----NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            E T     RA +AEF++TL+F++    + + +   +   A                              ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+      +K   +    +    A  L+ G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:   29 ELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQF 266          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 80/235 (34.04%), Postives = 118/235 (50.21%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX--------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RA +AEFI+TL+F++    + + +   T   A+                                 ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K   +         A +L+SG      +  EIV TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V      WD+HW++WVGPL+G  +A   +++
Sbjct:   42 RAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQY 275          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 79/227 (34.80%), Postives = 117/227 (51.54%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RAA+AEFI+TL+F++    + + + K T   A+                         ISGGH+NPAVTFG F+   +SLLR ++Y IAQ  G+     L+K    G        A +++ G     A   E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++      WD+HW++WVGP +G   A   +++
Sbjct:   40 RAAIAEFIATLLFLYITVATVIGYKKETDPCASV--GLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQY 263          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 78/232 (33.62%), Postives = 117/232 (50.43%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            RA +AEF++TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY  AQ LG+     L+K   +G        A  +S+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:   41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 271          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 81/241 (33.61%), Postives = 118/241 (48.96%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            E T     RA +AEFI+TL+F++    + + +   +    NT                              ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K   +         A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:   33 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 78/233 (33.48%), Postives = 116/233 (49.79%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RA +AEFI+TL+F++    + + +   T   A+                               ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K       N     A  L++G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +W NHW++WVGP +G  +A   +++
Sbjct:   42 RAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQY 273          
The following BLAST results are available for this feature:
BLAST of CK933910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PIP23_ORYSJ2.453e-2733.33Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
AQP8_RAT2.453e-2740.96Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
PIP22_ARATH4.185e-2733.05Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
AQP8_HUMAN4.185e-2740.96Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
PIP23_ARATH5.466e-2733.05Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_MAIZE5.466e-2734.04Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP1_ATRCA5.466e-2734.80Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_MAIZE7.138e-2733.62Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP22_ORYSJ7.138e-2733.61Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP21_ORYSJ7.138e-2733.48Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933910 ID=CK933910; Name=CK933910; organism=Citrus sinensis; type=EST; length=879bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGT
TCAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGT
CGCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCT
ATGTNAGTTTGCACGGATGTTGTATTTAA
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