CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 338.961 bits (868), Expect = 1.827e-92
Identity = 173/218 (79.36%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 172/218 (78.90%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 172/218 (78.90%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 172/218 (78.90%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 172/218 (78.90%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 172/218 (78.90%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I IIP+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 337.806 bits (865), Expect = 4.070e-92
Identity = 171/216 (79.17%), Postives = 193/216 (89.35%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKL+   ELFI+IIP+K   TLT++D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVA++VVVT+K+NDDEQY+WES AGGSFTV  D SGEPLGRGTK+ L++KEDQLEYLEE +IK +V KHS+FI YPI L  EK  EKE+SD
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGKELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHIKEDQLEYLEESKIKQIVNKHSQFIGYPIKLLVEKEREKEVSD 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 4.070e-92
Identity = 171/218 (78.44%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   EL I I+P+   +TLT+VD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKEISD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDILPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISD 227          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 337.806 bits (865), Expect = 4.070e-92
Identity = 172/218 (78.90%), Postives = 193/218 (88.53%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   +L I +IP+K ++TLTIVD+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG YSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEPLGRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   15 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKDLKINLIPNKHDRTLTIVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGSYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRLD-NGEPLGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIRLFVEKERDKEVSD 231          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 9.067e-92
Identity = 170/218 (77.98%), Postives = 192/218 (88.07%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   +L I I+P+  + TLT++D+GIGMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+VVV TKHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LYLKEDQ EYLEERR+K++VKKHS+FI YPI L+ EK  EKE+SD
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKDLKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYVEKEREKEVSD 227          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90B_BOVIN1.827e-9279.36Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90B_RAT2.386e-9278.90Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB2.386e-9278.90Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA2.386e-9278.90Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN2.386e-9278.90Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE2.386e-9278.90Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HSP83_ANOGA4.070e-9279.17Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HS90B_MOUSE4.070e-9278.44Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90A_CHICK4.070e-9278.90Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90B_CHICK9.067e-9277.98Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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