CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.946e-51
Identity = 107/218 (49.08%), Postives = 158/218 (72.48%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            ET  FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L +R++ DK N+TLTI D+GIGMT+  ++ +LGTIA+SGT EF + L    G D  +IGQFGVGFYSA++VA++V V ++      EQ + WES+  GSFTV  DV+ E  GRGT + L+L+ ++ E+L++ R++ +V K+S+ IS P+ ++ E T ++E
Sbjct:    8 ETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIGQFGVGFYSAFIVADKVTVVSRAAGTAPEQGVQWESEGEGSFTVA-DVTKE--GRGTDVILHLRAEEEEFLDDWRLRAVVAKYSDHISVPVEMFKEGTPDRE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.325e-50
Identity = 102/225 (45.33%), Postives = 154/225 (68.44%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+ +  +G  EL +RI  DK   T+TI D+GIGMT+  ++ +LGTIA+SGT EF + +      D  +IGQFGVGFYS+++VA+RV V T+   H+ DE  +WES   G FTV          RGT++TL+L++D+ E+ ++ R++ ++ K+S+ IS P+ ++ E T   E ++
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGDGELRVRISADKEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLIGQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEGDFTVETITK---QSRGTEITLHLRDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.033e-50
Identity = 103/225 (45.78%), Postives = 156/225 (69.33%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ S  +G  EL +R+  DK   T+TI D+GIGMT+  ++ +LGTIA+SGT EF + L   +  D  +IGQFGVGFYSA++VA+RV V T+   H+ DE   WES+  G+F+V      E   RGTK+ L+L++++ E+ ++ R++ ++ K+S+ IS P+ ++ E T E++  D
Sbjct:    1 MSHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKDKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLIGQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEGNFSVETITKAE---RGTKIVLHLRDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPD 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 102/225 (45.33%), Postives = 156/225 (69.33%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+ +  +G  EL +RI  DK   T+TI D+GIGMT+  ++ +LGTIA+SGT +F + L      D  +IGQFGVGFYS+++VA+RV V T+   H+ DE  +WES   G FTV   +S +   RGT++TL+L++D+ E+ ++ R++ ++ K+S+ IS P+ ++   T   E ++
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDNLYEGDGELRVRISADKEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTADFFKKLSGDESKDSQLIGQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEGDFTV-ETISKQT--RGTEITLHLRDDEKEFADDYRLRSIITKYSDHISVPVEMFEAGTPAVEATE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 102/225 (45.33%), Postives = 150/225 (66.67%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL+L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT     +G  EL +R+  D    T+TI D+GIGMT+  ++ +LGTIA+SGT EF + L      D  +IGQFGVGFYSA++VA++V V T+   H  DE   WES   G FTV   V      RGT++ L+L+E++ E+  + R++ ++ K+S+ IS P+ +W E T  +E ++
Sbjct:    1 MSHQETHGFQTEVKQLLNLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTKDELYEGDGELRVRVSADSEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDESKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGHAADEAVQWESAGEGEFTVENIVKE---SRGTEIILHLREEEKEFASDYRLRSIITKYSDHISVPVEMWQEGTPAQEATE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 105/224 (46.88%), Postives = 151/224 (67.41%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKH---NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            A  ET  FQAE+ QLL L+I++ YSNK+IFLRELISN+SDA+DK+RF+SL D+S L+G+ +L IR+  DK  +T+T+ D+GIGMT+ ++  NLGTIARSGTK F++ L      D  +IGQFGVGFYSA++VAE V V T+      +    W S   G++T+  +   E   RGT++ L L E Q EYL++ R+K +++++S+ I  PI +  +   + E  D
Sbjct:    5 AHKETLEFQAEVQQLLHLMIHSLYSNKDIFLRELISNASDAIDKLRFQSLQDESLLEGEGDLRIRVSVDKDARTITVADNGIGMTRDEVAENLGTIARSGTKAFLDQLTGDQQKDAKLIGQFGVGFYSAFVVAEHVTVHTRKAGLGAEHGVRWSSDGKGAYTLENEEVAE---RGTRVVLTLPESQSEYLDDWRLKGIIRRYSDHIDVPIQMPAQAEDKDEPED 225          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50
Identity = 105/216 (48.61%), Postives = 155/216 (71.76%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTE 773
            ET  FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L +R++ DK N+TLTI D+GIGMT+  ++ +LGTIA+SGT EF + L    G D  +IGQFGVGFYSA++VA++V V ++      EQ + WES+  GSFTV  DV+    GRGT + L+L+ ++ E+L++ R++ +V K+S+ IS P+ ++ E T +
Sbjct:    8 ETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIGQFGVGFYSAFIVADKVTVVSRAAGTAPEQGVQWESEGEGSFTVA-DVT--KAGRGTDVILHLRAEEDEFLDDWRLRSVVSKYSDHISVPVEMYKEGTPD 220          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.586e-50
Identity = 104/213 (48.83%), Postives = 153/213 (71.83%), Query Frame = 3
Query:  144 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ---AGADVSMIGQFGVGFYSAYLVAERVVVTTKHND--DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKT 767
            T  FQ E+ QLL L+I++ YSN++IFLRELISNSSDA+DKIRFE+ +++  L+G  +  I++IPDK   TLTI+D+GIGMT A++  N+GTIARSGTK FM+AL+   A  +  +IGQFGVGFY++++VA+RV++ T+      +   WES   GS+T+          RGT++ L+LK++  EYLEE +I+ +VKK+S++I YP+ +   +T
Sbjct:    5 TKQFQTEVKQLLDLVIHSLYSNRDIFLRELISNSSDAIDKIRFEAHSNEELLEGNSDWKIKLIPDKDAGTLTILDNGIGMTMAEVEENIGTIARSGTKAFMQALKDKSATDNPELIGQFGVGFYASFMVADRVILETRKGGTASDGCRWESIGDGSYTIEECSLDR---RGTEIVLHLKDEFKEYLEEWKIRSIVKKYSDYIQYPVVMDITRT 214          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHESH (Chaperone protein htpG OS=Shewanella sediminis (strain HAW-EB3) GN=htpG PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.121e-49
Identity = 101/225 (44.89%), Postives = 153/225 (68.00%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL+L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+ +  +G  EL +RI  +K   T+TI D+GIGMT+  ++ +LGTIA+SGT +F + L      D  +IGQFGVGFYS+++VA++V V T+   H  DE   WES   G FTV   V      RGT++ L+L+E++ E+ ++ R++ ++ K+S+ IS P+ +W E T   E ++
Sbjct:    1 MSQQETHGFQTEVKQLLNLMIHSLYSNKEIFLRELVSNAADASDKLRYEALTNDALYEGDGELRVRISTNKEKGTVTIEDNGIGMTRDTVIEHLGTIAKSGTADFFKNLSGDESKDSQLIGQFGVGFYSSFIVADKVTVRTRAAGHGSDEGVQWESAGEGDFTVDTIVKET---RGTEIVLHLREEEKEFADDYRLRSIITKYSDHISVPVEMWEEGTPAIEATE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.121e-49
Identity = 108/228 (47.37%), Postives = 152/228 (66.67%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYL----WTEKTTEKEISD 788
            A  ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ + S L+   +L IRI  D A +TL I D+GIGM++ + + NLGTIARSGTKEF + L      D ++IGQFGVGFYSA++VA++V V T+      DE   WES   G FTV      E   RGT +TL+++E + ++L   R+K +++K+S+ IS PI +    W   T+  + +D
Sbjct:    3 APHETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADTAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLSGDQQKDAALIGQFGVGFYSAFIVADKVTVETRRAGVAADEAVRWESTGDGEFTVDAITRAE---RGTTITLHMREGEDDFLSAWRLKSIIQKYSDHISLPIRMPKEVWDADTSAYKRTD 227          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_AERS45.946e-5149.08Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_SHEHH1.325e-5045.33Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_SHEAM5.033e-5045.78Chaperone protein htpG OS=Shewanella amazonensis (... [more]
HTPG_SHEPA6.574e-5045.33Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_SHELP6.574e-5045.33Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_ALHEH6.574e-5046.88Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HTPG_AERHH6.574e-5048.61Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_PELPD8.586e-5048.83Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_SHESH1.121e-4944.89Chaperone protein htpG OS=Shewanella sediminis (st... [more]
HTPG_RALEJ1.121e-4947.37Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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