CK934228

Overview
NameCK934228
Unique NameCK934228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11916 contig Csv1_Contig11916:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 59/162 (36.42%), Postives = 78/162 (48.15%), Query Frame = 2
Query:  113 RVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKL------VKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHLP 580
            RV + L  K ++FE   VDL KGEH  PE+LKL P G +PV+  GD  + +S AII Y  EK+      LL + +++R L  Q   +   N   P+  + V      KLG   DEKL      +KK    L K+L  +        Y  GD   LADL   P
Sbjct:   22 RVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGYVPVLVHGDIVIADSLAIIMYLEEKFPE--NPLLPQDLQKRALNYQAANIVTSNIQ-PLQNLAVLNYIEEKLG--SDEKLSWAKHHIKKGFSALEKLLKGH-----AGKYATGDEVGLADLFLAP 173          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT2_MUSDO (Glutathione S-transferase 2 OS=Musca domestica GN=Gst2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHL 577
            Y P  A  + VI+      IE     ++L +GEH  PE+LK+ P   +P + D  F ++ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +         + T      +K     D +L KK E  L + L+++   LS+S Y AG+  +LADL+ L
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGETMTLADLAIL 161          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT3_DROME (Glutathione S-transferase D3 OS=Drosophila melanogaster GN=GstD3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13
Identity = 49/185 (26.49%), Postives = 91/185 (49.19%), Query Frame = 2
Query:  143 IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHLPFTQY--LVGPMEKEYMIRDRKHVSAWWDDISN-RPSWKK 688
            +EF    ++ +KGE  NP+++K+ P  ++P + D  FT++ESRAI+ Y  EKY  +   L  K I+++ ++ Q L  +    +P +     +     + G   D K       K+ +  D     L   +Y+AGD +++AD++ L       +VG     + I    +V+ W+D +    P W++
Sbjct:    8 LEFNKKIINTLKGEQMNPDFIKINPQHSIPTLVDNGFTIWESRAILVYLVEKY-GKDDALYPKDIQKQAVINQRLYFDMALMYPTLANYYYKAFTTGQFGSEEDYK-------KVQETFDFLNTFLEGQDYVAGDQYTVADIAILANVSNFDVVG-----FDISKYPNVARWYDHVKKITPGWEE 179          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT3_MUSDO (Glutathione S-transferase 3 OS=Musca domestica GN=Gst3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.867e-13
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHL 577
            Y P  A  + VI+      IE     ++L +GEH  PE+LK+ P   +P + D  F ++ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +         + T      +K     D +L KK E  L + L+++   LS+S Y AG   +LADL+ L
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGQTMTLADLAIL 161          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 58/201 (28.86%), Postives = 104/201 (51.74%), Query Frame = 2
Query:   71 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAH----NYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSNYLAGDFFSLADLSHLPFTQYLVGPMEKEY-MIRDRKHVSAW 652
            M ++++    + P R +    +K  I  E   VDL+KG+H++ E+L++   G LP ++DGDF L ES AI+ Y + KY++         ++ R  V ++L   A      +  P++   VQ+L    +G+ V E+ V+++   + + L   E++ L    +LAG   +LADL  L   + L+ P+   Y +   R  ++AW
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTP-DHWYPSDLQARARVHEYLGWHADCIRGTFGIPLW---VQVL-GPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMAL---EELMQPVALGYELFEGRPRLAAW 193          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT1_LUCCU (Glutathione S-transferase 1-1 OS=Lucilia cuprina GN=GST1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12
Identity = 52/164 (31.71%), Postives = 77/164 (46.95%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHL 577
            Y P  A  + V++      IE     ++L  GEH  PE+LK+ P   +P + DGDF L+ESRAI+ Y  EKY  +   L  K  ++R ++ Q L  +    +    +     +FA       D +L KK E       D     L    Y+AGD  ++ADL+ L
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKNDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELYKKME----AAFDFLNTFLEGHQYVAGDSLTVADLALL 160          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT2_MOUSE (Glutathione S-transferase theta-2 OS=Mus musculus GN=Gstt2 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 50/197 (25.38%), Postives = 98/197 (49.75%), Query Frame = 2
Query:   71 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSN-YLAGDFFSLADLSHLPFTQYLVGPMEKEY-MIRDRKHVSAW 652
            M +++Y    + P R +    +K  I F+T  VD++KG+H + ++ ++     +PV++DG F L ES AI+ Y + KY+          ++ R  V ++L   A N       +    +    +G+ V ++ V+++ +++  VL   E++  +   +L G   +LADL  L   + L+ P+   Y +   R  ++AW
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQTRTVDILKGQHMSEQFSQVNCLNKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPQEKVERNRDRMVLVLQQLEDKFLRDRAFLVGQQVTLADLMSL---EELMQPVGLGYNLFEGRPQLTAW 193          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: DCMA_METS1 (Dichloromethane dehalogenase OS=Methylophilus sp. (strain DM11) GN=dcmA PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 64/222 (28.83%), Postives = 107/222 (48.20%), Query Frame = 2
Query:   65 TTMVVKVYGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYL-KLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHN-------YHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSNYLAGDFFSLADL-------SH-----LPFTQYLVGPMEKEYMIR--DRKH---VSAW 652
            +T +  ++ PA    + V   ++E  IEF+   VD+    +  PE+  +  P G +P++ DGDFT++ES AI+ Y +EKY    +   G T+EERG ++Q++   A+        +H  I+     +++      +V+   V K    L +  D+ E+  L   +YL G+  S  DL       SH     +P + +   P  K +  R  DR+H   VSAW
Sbjct:    2 STKLRYLHHPASQPCRAVHQFMLENNIEFQEEIVDITTDINEQPEFRERYNPTGQVPILVDGDFTIWESAAIVYYLSEKY-DCSSSWWGSTLEERGHIQQYMHWYAYTLRLGGGAFHWTIF---APMIYGYDKDFTVE---VTKGRFLLYESFDILEKYWLKDGDYLCGNTLSYPDLATCQDLVSHDAGRIIPTSMWDSHPKVKAWFARMMDREHAKTVSAW 216          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT4_MUSDO (Glutathione S-transferase 4 OS=Musca domestica GN=Gst4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 54/165 (32.73%), Postives = 76/165 (46.06%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFAS-KLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHL 577
            Y P  A  + V++      IE     + L +G H  PE+LK+ P   +P + D  F L+ESRAI+ Y  EKY  Q   L     ++R L+ Q L  +       +Y+      +   K     D +L KK E      LD     LS+S Y AGD  +LADL+ L
Sbjct:    5 YLPLSAPCRSVLMTAKALGIELNKKLLKLFEGGHLKPEFLKINPQHTIPTLVDNGFALWESRAIMVYLVEKYGKQDDPLYPSCPKKRALINQRLYFDMGT----LYQGFANYFYPQFKEKKPADPELFKKFE----VTLDFLNTFLSESKYAAGDSLTLADLALL 161          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT1_MUSDO (Glutathione S-transferase 1 OS=Musca domestica GN=Gst1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 52/164 (31.71%), Postives = 76/164 (46.34%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHL 577
            Y P  A  + V++      IE     ++L  GEH  PE+LK+ P   +P + DGDF L+ESRAI+ Y  EKY  +   L  K  ++R ++ Q L  +    +    +     +FA       D +L KK E       D     L    Y AGD  ++ADL+ L
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKTDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELFKKIE----TAFDFLNTFLKGHEYAAGDSLTVADLALL 160          
The following BLAST results are available for this feature:
BLAST of CK934228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GSTZ1_DIACA9.051e-1436.42Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTT2_MUSDO3.439e-1332.93Glutathione S-transferase 2 OS=Musca domestica GN=... [more]
GSTT3_DROME4.492e-1326.49Glutathione S-transferase D3 OS=Drosophila melanog... [more]
GSTT3_MUSDO5.867e-1332.93Glutathione S-transferase 3 OS=Musca domestica GN=... [more]
GSTT2_HUMAN1.001e-1228.86Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT1_LUCCU1.707e-1231.71Glutathione S-transferase 1-1 OS=Lucilia cuprina G... [more]
GSTT2_MOUSE2.912e-1225.38Glutathione S-transferase theta-2 OS=Mus musculus ... [more]
DCMA_METS13.803e-1228.83Dichloromethane dehalogenase OS=Methylophilus sp. ... [more]
GSTT4_MUSDO6.486e-1232.73Glutathione S-transferase 4 OS=Musca domestica GN=... [more]
GSTT1_MUSDO6.486e-1231.71Glutathione S-transferase 1 OS=Musca domestica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_H05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934228 ID=CK934228; Name=CK934228; organism=Citrus sinensis; type=EST; length=879bp
GGGGACAAACTCACTCACTGCTTTTTATTGAGAGAAAAAGTTAAGAAAGA
GAATAGCAAAAGCAACAACAATGGTGGTAAAGGTGTATGGTCCAGCTTAT
GCTTCTCCCAAACGGGTGATTGTGTGCTTGATTGAGAAGCAAATCGAATT
TGAAACTGCTCCCGTTGATCTCATCAAAGGAGAGCATAGAAATCCTGAGT
ACCTCAAATTGCAGCCTTTCGGAGCTCTTCCTGTCATTCAAGATGGAGAT
TTTACGTTATACGAATCTCGAGCTATCATAAGGTACTACGCCGAAAAGTA
CAGGTCTCAAGGAACCGAACTTCTGGGAAAAACAATTGAAGAAAGAGGCC
TGGTGGAACAATGGCTAGAAGTAGAGGCACACAACTATCACCCGCCAATT
TACGAGATGACCGTGCAACTTTTATTTGCCTCCAAGTTGGGACTTTCTGT
TGATGAAAAATTGGTAAAAAAGAGTGAAGAAAAGCTTGGAAAAGTTCTCG
ATGTTTACGAGGAGAGGCTCTCAAAGAGCAATTATTTGGCTGGTGATTTC
TTCAGCCTGGCTGATCTGAGTCACCTTCCTTTTACTCAATACTTGGTTGG
GCCGATGGAGAAGGAGTACATGATTAGAGACAGAAAGCATGTGAGTGCTT
GGTGGGATGATATTAGCAACAGGCCATCCTGGAAGAAAGTCCTTGAGCTT
TATTAGCTACTTTGGCTGAGCTTGATTTCATGTAATAATAATCGTGGGGC
TTGTGTTTTTACTCCTGCCTCCTAGTTTGTTCATGTGTTTGGCGATATGT
ATCTTTCTTGTGTCTTTTTGGTTTTTATAAATAAATGCTTGGGGCCTTGG
GAGAAAAAAAAAAAAAAAAAAAAAAAAAA
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