CK934228

Overview
NameCK934228
Unique NameCK934228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11916 contig Csv1_Contig11916:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  113 RVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKL 463
            RV + L  K ++FE   VDL+KGEH  PE+LKL P G +P +  GD  + +S AII Y  EK+      LL + +++R L  Q   + A N   P   + V      KLG   DEKL
Sbjct:   22 RVRIALHLKGLDFEYKAVDLLKGEHLTPEFLKLNPLGYVPALVHGDIVIADSLAIIMYLEEKFPE--NPLLPRDLQKRALNYQAANIVASNIQ-PFQNLAVLNYIEEKLG--SDEKL 133          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GST1D_ANOGA (Glutathione S-transferase 1, isoform D OS=Anopheles gambiae GN=GstD1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 52/162 (32.10%), Postives = 77/162 (47.53%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLS 571
            Y P  A  + V +      +E      DL+KGEH  PE+LKL P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q L  +    +    +     +FA +     +EK +K +   L   L+  E       Y AG+  ++ADLS
Sbjct:    5 YLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFALWESRAIQIYLAEKY-GKDDKLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQPANPENEKKMKDAVGFLNTFLEGQE-------YAAGNDLTIADLS 158          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT4_HUMAN (Glutathione S-transferase theta-4 OS=Homo sapiens GN=GSTT4 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 2
Query:   71 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMT-VQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSNYLAGDFFSLADL 568
            M +++Y    + P R +    +K  I FE   VDLIKG H + EY+ + P   LP ++DG F L ES AI+ Y   KY S  +      +  R  V++++  +   +  P+ ++  ++LL     G  V  + ++ + E++   L ++EE  L    ++ G+  SLADL
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGHHHSKEYIDINPLRKLPSLKDGKFILSESAAILYYLCRKY-SAPSHWCPPDLHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADL 168          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT4_MOUSE (Glutathione S-transferase theta-4 OS=Mus musculus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 48/169 (28.40%), Postives = 88/169 (52.07%), Query Frame = 2
Query:   71 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYE-MTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSNYLAGDFFSLADL 568
            M +++Y    ++P R +     K  I F+   VDL+KG H + EY+++ P   LP ++DG F L ES AI+ Y   KY S  +      +  R  V++++  +      P+ + + ++L+     G  V  + ++K+ +++ + L  +EE+ L    ++ GD  SLADL
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKLPSLKDGKFILSESVAILFYLCRKY-SAPSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILWIKLIIPMITGEEVPTERLEKTLDEVKRNLQQFEEKFLQDKMFITGDHISLADL 168          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GST1_SCHPO (Glutathione S-transferase 1 OS=Schizosaccharomyces pombe GN=gst1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 51/179 (28.49%), Postives = 92/179 (51.40%), Query Frame = 2
Query:   68 TMVVKVYGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQD---GDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHLPFTQYL 595
            T+    +GP   +P +V+  L E  + +ET  V+  K E ++PE+L L P G +P + D    D+T++ES AI+ Y A+KY ++    L +   E   V Q+L  +A        +     ++  +L +S     + +   ++ +VL V E+ L   +YL  + F++ADLS + +  +L
Sbjct:    5 TLWSHAHGP---NPWKVVQALKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQELVISA----ITRYRNEIKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFL 176          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT4_RAT (Glutathione S-transferase theta-4 OS=Rattus norvegicus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 47/169 (27.81%), Postives = 87/169 (51.48%), Query Frame = 2
Query:   71 MVVKVYGPAYASPKRVIVCLIEKQ-IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYE-MTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEER-LSKSNYLAGDFFSLADL 568
            M +++Y    ++P R +     K  I F+   VDL+KG H + EY+++ P   +P ++DG F L ES AI+ Y   KY S  +      +  R  V++++  +      P+ + + ++L+     G  V  + + K+ +++ K +  +EE+ L    ++ GD  SLADL
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKVPSLRDGKFILSESVAILCYLCRKY-SAPSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILWIKLIIPMITGEEVPTERLDKTLDEVNKNIKQFEEKFLQDKLFITGDHISLADL 168          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: GSTT4_DROME (Glutathione S-transferase D4 OS=Drosophila melanogaster GN=GstD4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 53/201 (26.37%), Postives = 91/201 (45.27%), Query Frame = 2
Query:   86 YGPAYASPKRVIVCLIEKQIEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADLSHLPFTQYLVGPME-KEYMIRDRKHVSAWWDDISN-RPSW 682
            Y P  +  + +I+      +E     + + +GEH  PE+LKL P   +P + D  F ++ESRAI  Y  EKY  +   L     ++R L+ Q L  +    H    +     +   +LG + + K V+ + E     LD++   L   +Y+AG   ++AD++ L      V   E  E+ I    +V+ W+ +     P W
Sbjct:    5 YSPRSSGSRTIIMVAKALGLELNKKQLRITEGEHLKPEFLKLNPQHTIPTLVDNGFAIWESRAIAVYLVEKY-GKDDSLFPNDPQKRALINQRLYFDMGTLHDSFMKYYYPFIRTGQLGNAENYKKVEAAFE----FLDIF---LEGQDYVAGSQLTVADIAILS----SVSTFEVVEFDISKYPNVARWYANAKKITPGW 193          
BLAST of CK934228 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 53/195 (27.18%), Postives = 91/195 (46.67%), Query Frame = 2
Query:  143 IEFETAPVDLIKGEHRNPEYLKLQPFGALPVIQDGDFTLYESRAIIRYYAEKYRSQGTELLGKTIEERGLVEQW-----LEVEAH--NYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSNYLAGDFFSLADL-----SHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRPSWKKV 691
            ++ E AP   +   ++ PEYLKL P G +P+++  D  ++ES AI RY A         L+G ++ +   +EQW     LE++A+  ++  P +   V L  A +  +S            L + L      L+ + YL G F +LAD+         FT+ ++     E+      HV  ++  + N+P +KKV
Sbjct:   26 VKVELAPDFEMGVTNKTPEYLKLNPIGKVPLLETPDGPIFESNAIARYVAR--LKADNPLIGSSLIDYAHIEQWIDFGSLEIDANIISWFRPRFGYAVYLPPAEEAAISA-----------LKRALGALNTHLASNTYLVGHFVTLADIIVTCNLFFGFTKLMIKSFTSEF-----PHVERYFWTLVNQPKFKKV 202          
The following BLAST results are available for this feature:
BLAST of CK934228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GSTZ2_DIACA8.471e-1239.32Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
GST1D_ANOGA8.471e-1232.10Glutathione S-transferase 1, isoform D OS=Anophele... [more]
GSTT4_HUMAN1.106e-1129.59Glutathione S-transferase theta-4 OS=Homo sapiens ... [more]
GSTT4_MOUSE1.887e-1128.40Glutathione S-transferase theta-4 OS=Mus musculus ... [more]
GST1_SCHPO2.465e-1128.49Glutathione S-transferase 1 OS=Schizosaccharomyces... [more]
GSTT4_RAT5.491e-1127.81Glutathione S-transferase theta-4 OS=Rattus norveg... [more]
GSTT4_DROME7.171e-1126.37Glutathione S-transferase D4 OS=Drosophila melanog... [more]
EF1G_PRUAV7.171e-1127.18Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_H05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934228 ID=CK934228; Name=CK934228; organism=Citrus sinensis; type=EST; length=879bp
GGGGACAAACTCACTCACTGCTTTTTATTGAGAGAAAAAGTTAAGAAAGA
GAATAGCAAAAGCAACAACAATGGTGGTAAAGGTGTATGGTCCAGCTTAT
GCTTCTCCCAAACGGGTGATTGTGTGCTTGATTGAGAAGCAAATCGAATT
TGAAACTGCTCCCGTTGATCTCATCAAAGGAGAGCATAGAAATCCTGAGT
ACCTCAAATTGCAGCCTTTCGGAGCTCTTCCTGTCATTCAAGATGGAGAT
TTTACGTTATACGAATCTCGAGCTATCATAAGGTACTACGCCGAAAAGTA
CAGGTCTCAAGGAACCGAACTTCTGGGAAAAACAATTGAAGAAAGAGGCC
TGGTGGAACAATGGCTAGAAGTAGAGGCACACAACTATCACCCGCCAATT
TACGAGATGACCGTGCAACTTTTATTTGCCTCCAAGTTGGGACTTTCTGT
TGATGAAAAATTGGTAAAAAAGAGTGAAGAAAAGCTTGGAAAAGTTCTCG
ATGTTTACGAGGAGAGGCTCTCAAAGAGCAATTATTTGGCTGGTGATTTC
TTCAGCCTGGCTGATCTGAGTCACCTTCCTTTTACTCAATACTTGGTTGG
GCCGATGGAGAAGGAGTACATGATTAGAGACAGAAAGCATGTGAGTGCTT
GGTGGGATGATATTAGCAACAGGCCATCCTGGAAGAAAGTCCTTGAGCTT
TATTAGCTACTTTGGCTGAGCTTGATTTCATGTAATAATAATCGTGGGGC
TTGTGTTTTTACTCCTGCCTCCTAGTTTGTTCATGTGTTTGGCGATATGT
ATCTTTCTTGTGTCTTTTTGGTTTTTATAAATAAATGCTTGGGGCCTTGG
GAGAAAAAAAAAAAAAAAAAAAAAAAAAA
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