CK934232

Overview
NameCK934232
Unique NameCK934232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934232_ssr145 microsatellite CK934232_ssr145:145..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:39..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.988e-38
Identity = 88/200 (44.00%), Postives = 110/200 (55.00%), Query Frame = 1
Query:  286 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            FK K+ + Y   EE  YR  +F+ N +      K+ +  + T    + KF D+T  EF     G   R   P      P   T    T+ DWR  GAVT VKDQG CGSCW+FS TG+LEG HFL TG L+SL+EQQLVDC     P+       GCNGG MN AF+YI    G++ E  YPY   D GSC+FD + +AA
Sbjct:   23 FKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFY-PKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIKANNGIDTEAAYPYEARD-GSCRFDSNSVAA 213          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.533e-37
Identity = 88/211 (41.71%), Postives = 126/211 (59.72%), Query Frame = 1
Query:  223 VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            V + G +SE  +++    + L K   +++  +  E D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG        RR  L  +A+       ++LP   DWR  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG
Sbjct:   35 VSTTGGRSEAEVMSIYEAW-LVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDG 231          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.615e-37
Identity = 89/214 (41.59%), Postives = 126/214 (58.88%), Query Frame = 1
Query:  250 DHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 867
            +HL N +    LF+S   + SK Y + EE  +RF VF+ NL    +R     +   G+ +F+DLT  EF+ ++LGL     +R+ +  A+ +   I    DLP   DWR  GAV  VKDQG CGSCW+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+  GG+ +E DYPY   + G C+  K  +
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI---TDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCD--------TTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYL-MEEGICQEQKEDV 240          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.937e-37
Identity = 84/191 (43.98%), Postives = 118/191 (61.78%), Query Frame = 1
Query:  262 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 822
            N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT  EF R  L  +    +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K GG+  E +YPY
Sbjct:   15 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTAS--WVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPY 193          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.695e-36
Identity = 88/200 (44.00%), Postives = 110/200 (55.00%), Query Frame = 1
Query:  286 FKSKFSKTYATQEEHDYRFRVFKANLR----RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            FK+KF K YA  EE  +R  VF   L+      +R    + T    +  FSDLT  E      G+ RR    +   K+   PT  +  D DWR+ GAVT VKDQG CGSCW+FSA  ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG    A++YI+   G++ E  YPY   D  +C++D   I A
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA--PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID-DNCRYDAGNIGA 212          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.695e-36
Identity = 93/209 (44.50%), Postives = 119/209 (56.94%), Query Frame = 1
Query:  244 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 864
            S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G    SC F   K
Sbjct:  176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYL--NTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG-HMQSCNFSAEK 372          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.214e-36
Identity = 85/186 (45.70%), Postives = 115/186 (61.83%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 828
            F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKFSDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG 339          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.891e-36
Identity = 90/220 (40.91%), Postives = 125/220 (56.82%), Query Frame = 1
Query:  223 VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 846
            +PSDG+   D  + +   +  + ++  KT         + D RF +FK NLR        +  A +  G+TKF+DLT  E+R+ +LG      RR+    +  +      N  ++P   DWR  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY G  GG C
Sbjct:   33 LPSDGKWRTDEEVRSI--YLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGF-GGKC 241          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.932e-36
Identity = 79/204 (38.73%), Postives = 122/204 (59.80%), Query Frame = 1
Query:  256 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 864
            LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL   L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E +++ GGV+ E DYPY G+D G+C+ D +K
Sbjct:   21 LLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSD-GNCRVDVAK 214          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.932e-36
Identity = 91/207 (43.96%), Postives = 117/207 (56.52%), Query Frame = 1
Query:  286 FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++DL   EFR+   G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+FS+TGALEG HF  +G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY   D  SC F+K  + A
Sbjct:   62 FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAID-DSCHFNKGTVGA 260          
The following BLAST results are available for this feature:
BLAST of CK934232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP2_HOMAM8.988e-3844.00Digestive cysteine proteinase 2 OS=Homarus america... [more]
RD21A_ARATH1.533e-3741.71Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
XCP1_ARATH2.615e-3741.59Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATL_SCHMA9.937e-3743.98Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CRUST_PANBO1.695e-3644.00Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATF_HUMAN1.695e-3644.50Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE2.214e-3645.70Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
GCP1_ARATH2.891e-3640.91Germination-specific cysteine protease 1 OS=Arabid... [more]
CATV_NPVHC4.932e-3638.73Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATL_DROME4.932e-3643.96Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934232 ID=CK934232; Name=CK934232; organism=Citrus sinensis; type=EST; length=878bp
GGGGGAGAAATTAGGTGTCGAAATCTCATACGCGGACCCAACCACAAGTT
TCTTCTGTCTTTTTGGAAACATTTATTATCTGCTTCATCCTGCTTTGCAG
TCCACTGGAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTC
CTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGA
CGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAG
ATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTC
TCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTT
CAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTG
CTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGC
CGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCA
AAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGC
GTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCG
TGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATC
GACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATC
ACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGT
GGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGA
GCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAAT
TTGACAAAAGCAAAATTGCTGCAGCTGT
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