CK934232

Overview
NameCK934232
Unique NameCK934232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934232_ssr145 microsatellite CK934232_ssr145:145..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:39..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36
Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 1
Query:  241 QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 864
            +S D L+     F  + S F K Y T EE   RF VFK NL+          +   G+ +F+DL+  EF++ +LGL   +    + +        D+   P   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+  K +
Sbjct:   42 ESHDKLIEL---FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKDE 240          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36
Identity = 79/201 (39.30%), Postives = 121/201 (60.20%), Query Frame = 1
Query:  268 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 861
            +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+E E +YPY       C F+++
Sbjct:  305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKK-NQCHFNRT 494          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36
Identity = 96/232 (41.38%), Postives = 128/232 (55.17%), Query Frame = 1
Query:  196 DDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 867
            D+   IR V  SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +
Sbjct:   27 DESNPIRMV--SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCS--ATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENV 245          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.099e-35
Identity = 89/214 (41.59%), Postives = 117/214 (54.67%), Query Frame = 1
Query:  268 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDG--GSCKFDKSKIAAA 876
            E  F+ FK K+ K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F    +RLR      K   + T   P   DWR+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  YPY   +G    C+ +  +I AA
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAA 236          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 4.175e-35
Identity = 80/190 (42.11%), Postives = 106/190 (55.79%), Query Frame = 1
Query:  304 KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            K+Y T EE   R+ +FKAN+   ++        V G+  F+D+T  E+R  +LG           Q+  +  T+   +  DWR  GAVT VK+QG CG CWSFS TG+ EGAHF S GELVSLSEQ L+DC  E         +SGC+GGLM  AFEYI+   G++ E  YPY   + G C++      A
Sbjct:   39 KSY-TSEEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSAASK-DWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE---------NSGCDGGLMTYAFEYIINNNGIDTESSYPYK-AENGKCEYKSENSGA 216          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.122e-35
Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 1
Query:  250 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 852
            D   NA+ H   +KS   + Y T EE ++R  V++ N+R  +          HG T     F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+
Sbjct:   22 DQTFNAQWH--QWKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKY 213          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.215e-34
Identity = 79/208 (37.98%), Postives = 121/208 (58.17%), Query Frame = 1
Query:  256 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 864
            LL A ++F  F  KF+K Y+++ E  +RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL+    LP   Q   +  IL  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GGV+ E DYPY  T  G C+ + ++
Sbjct:   21 LLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQCRINPNR 214          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.587e-34
Identity = 81/192 (42.19%), Postives = 108/192 (56.25%), Query Frame = 1
Query:  316 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            + EE + R+ +FKAN+             V G+  F+D++  E+R  +LG       P DA    +  ++   D     DWR  GAVT +K+QG CG CWSFS TGA EGA +L+ G+  LVSLSEQ L+DC        SGS  ++GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF+   +AA
Sbjct:   42 SSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDC--------SGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAA 219          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.587e-34
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 1
Query:  325 EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQK--APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            + D RF +FK NLR        +  A +  G+T F++LT  E+R  +LG      RR+    +     +  +  +++P   DWR  GAV  +KDQG CGSCW+FS   A+EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G
Sbjct:   24 QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNG 194          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.587e-34
Identity = 89/222 (40.09%), Postives = 120/222 (54.05%), Query Frame = 1
Query:  253 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK---RRQLLD---------PTAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 870
            +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +     R  LL+          +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA
Sbjct:   49 NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIA 259          
The following BLAST results are available for this feature:
BLAST of CK934232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
XCP2_ARATH8.413e-3639.34Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPR1_DROME8.413e-3639.30Putative cysteine proteinase CG12163 OS=Drosophila... [more]
ALEU_ARATH8.413e-3641.38Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP_TRYBB1.099e-3541.59Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP5_DICDI4.175e-3542.11Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL1_RAT7.122e-3541.46Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATV_NPVOP1.215e-3437.98Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP7_DICDI1.587e-3442.19Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP4_BRANA1.587e-3444.13Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATV_NPVHZ1.587e-3440.09Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934232 ID=CK934232; Name=CK934232; organism=Citrus sinensis; type=EST; length=878bp
GGGGGAGAAATTAGGTGTCGAAATCTCATACGCGGACCCAACCACAAGTT
TCTTCTGTCTTTTTGGAAACATTTATTATCTGCTTCATCCTGCTTTGCAG
TCCACTGGAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTC
CTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGA
CGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAG
ATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTC
TCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTT
CAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTG
CTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGC
CGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCA
AAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGC
GTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCG
TGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATC
GACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATC
ACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGT
GGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGA
GCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAAT
TTGACAAAAGCAAAATTGCTGCAGCTGT
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