CK934232

Overview
NameCK934232
Unique NameCK934232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934232_ssr145 microsatellite CK934232_ssr145:145..159. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:39..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28
Identity = 79/202 (39.11%), Postives = 109/202 (53.96%), Query Frame = 1
Query:  274 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            HF  +  +  K Y+ +E H +R +VF +N R+       + T   G+ +FSD++  E R ++L    +      A K   L  T   P   DWR  G  V+ VK+QG+CGSCW+FS TGALE A  ++TG+++SL+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D   CKF   K  A
Sbjct:   34 HFKSWMVQHQKKYSLEEYH-HRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQ---NCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD-DHCKFQPDKAIA 223          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.785e-28
Identity = 65/151 (43.05%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  421 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            F D+T  EFR+   G   +        +  +LP  ++PT  DWR+ G +T VKDQG CGSCW+FSATGALEG  F  TG+L+SL+EQ LVDC            + GCNGG M++ F Y+ + GG++ E  YPY G    +C+++    AA
Sbjct:   23 FGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLP--EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDC-------SGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEG-KVKTCRYNPKYSAA 163          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.785e-28
Identity = 79/202 (39.11%), Postives = 106/202 (52.48%), Query Frame = 1
Query:  262 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 852
            N +  +  +K+   + Y   EE  +R  V++ N++  +          HG T     F D+T  EFR Q +G  R  +       + P+    DLP   DWR  G VT VK+Q  CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGG M  AF+Y+ + GG++ E+ YPY   D   CK+
Sbjct:   24 NLDTKWYQWKATHRRLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFL--DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD-EICKY 213          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 125.561 bits (314), Expect = 3.785e-28
Identity = 68/188 (36.17%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  295 KFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 855
            K+ K+Y +  E + RF +FK  LR         + +   G+ +F+DLT  EFR  +L           + +        LP+  DWR  GAV  +K QG CG CW+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNVD 227          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.438e-27
Identity = 75/202 (37.13%), Postives = 102/202 (50.50%), Query Frame = 1
Query:  244 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 822
            S+D L + E    LF S   K +K Y   +E  YRF +FK NL+    R  +      G+ +FSDL+  EF+ +++G      LP D    P           DLP   DWR  GAVT VK QG C SCW+FS    +EG + + TG LV LSEQ+LVDCD +           GCN G  +++ +Y+ +  G+     YPY
Sbjct:   34 SQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQ-NGIHLRAKYPY 220          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.438e-27
Identity = 67/197 (34.01%), Postives = 108/197 (54.82%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 849
            F  + +++ + Y   +E   RF++FK N+   +     +  +   G+ +F+D+T +EF  Q+ GL+    LP + ++ P++  +D+     P   DWRD GAVT VK+QG CGSCW+F++   +E  + +  G LVSLSEQQ++DC          +   GC GG +N A+ +I+   GV     YPY     G+CK
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK-GTCK 218          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27
Identity = 81/222 (36.49%), Postives = 115/222 (51.80%), Query Frame = 1
Query:  229 SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 873
            + G Q+ D  L+AE  +  +K+K++K+Y+ +EE   R  V++ N+R  K     +    +  T    KF D T  EFR+        + +PA A   P    +    LP   DWR+ G VT V++QG CGSCW+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+LK  G+E E  YPY G D G C++     +A
Sbjct:   15 ASGAQAHDPKLDAE--WKDWKTKYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSI----DNIPIPA-AMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD-GPCRYRSENASA 220          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 1
Query:  523 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 861
            + LP   DWR+ G + GVKDQG+CGSCW+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G   ++ K+
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKN 120          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 74/204 (36.27%), Postives = 109/204 (53.43%), Query Frame = 1
Query:  277 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL-RLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKI 867
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+ +F+DL+  E+     G + R  R       +    T+D   LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+  GG+  + DYPY   +G   G  K D   +
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNV 250          
BLAST of CK934232 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 73/202 (36.14%), Postives = 102/202 (50.50%), Query Frame = 1
Query:  244 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 837
            S+D L + E    LF S     +K Y   +E  YRF +FK NL         + +   G+ +F+DL+  EF  +++G      +     +  I   T +LP + DWR  GAVT V+ QG+CGSCW+FSA   +EG + + TG+LV LSEQ+LVDC+             GC GG    A EY+ K  G+     YPY    G
Sbjct:   34 SQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQG 225          
The following BLAST results are available for this feature:
BLAST of CK934232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATH_PIG1.699e-2839.11Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATL6_HUMAN3.785e-2843.05Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATL2_HUMAN3.785e-2839.11Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
ACTN_ACTCH3.785e-2836.17Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
PAPA4_CARPA1.438e-2737.13Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
ANAN_ANACO1.438e-2734.01Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATJ_MOUSE1.878e-2736.49Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CYSPL_SOLLC2.453e-2748.67Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR4_ARATH2.453e-2736.27Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
PAPA3_CARPA9.323e-2736.14Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934232 ID=CK934232; Name=CK934232; organism=Citrus sinensis; type=EST; length=878bp
GGGGGAGAAATTAGGTGTCGAAATCTCATACGCGGACCCAACCACAAGTT
TCTTCTGTCTTTTTGGAAACATTTATTATCTGCTTCATCCTGCTTTGCAG
TCCACTGGAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTC
CTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGA
CGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAG
ATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTC
TCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTT
CAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTG
CTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGC
CGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCA
AAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGC
GTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCG
TGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATC
GACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATC
ACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGT
GGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGA
GCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAAT
TTGACAAAAGCAAAATTGCTGCAGCTGT
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