EY756544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB1_BOVIN (High mobility group protein B1 OS=Bos taurus GN=HMGB1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB1_PIG (High mobility group protein B1 OS=Sus scrofa GN=HMGB1 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_RAT (High mobility group protein B2 OS=Rattus norvegicus GN=Hmgb2 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_PIG (High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_HUMAN (High mobility group protein B2 OS=Homo sapiens GN=HMGB2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_BOVIN (High mobility group protein B2 OS=Bos taurus GN=HMGB2 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB1_CHICK (High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+ +K PY KA K K +YEKD+ +Y + Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSK 162
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_CHICK (High mobility group protein B2 OS=Gallus gallus GN=HMGB2 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12 Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K DHP S+ K GE W DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: HMGB2_MOUSE (High mobility group protein B2 OS=Mus musculus GN=Hmgb2 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 298 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSENRPKIKIEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
BLAST of EY756544 vs. ExPASy Swiss-Prot
Match: SSRP1_RAT (FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 2 Query: 71 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 316 DPN PKRP SA+ +++ RE+ K DHP S+ + K GE WK MS+ K + KAE + EYEK MK Y + + +K Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYEGGRGDSSK 623 The following BLAST results are available for this feature:
BLAST of EY756544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756544 ID=EY756544; Name=EY756544; organism=Citrus sinensis; type=EST; length=772bpback to top |