EY711380

Overview
NameEY711380
Unique NameEY711380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.060e-55
Identity = 122/241 (50.62%), Postives = 153/241 (63.49%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYNYITSSLF*YFKFVKIDFIP*NSFGWLIFLQITNPCQNRVYFSSFCPSSPLVFWKRSGVLFGTMDGWKTNSSGYW---PRFIPLFAGFQGLLKYLLELNPT-PLSLQATRGERDFTGL 914
            +IGWIYGSVTEDILTGFKMHARGW SIYC P RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRL+ LER AY+NT +YP+T+IPL+ YC LPA CL+T++FI+P++ N              +  I FI       L+F+ I                + ++  + SGV   +++ W  N   +W        LFA FQGLLK L  ++    ++ +AT  + DF  L
Sbjct:  769 EIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISN--------------YASIWFI-------LLFISIA--------------VTGILELRWSGV---SIEDWWRNEQ-FWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGDFAEL 970          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.084e-55
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFN 566
            +IGWIYGSVTEDILTGFKMH RGW+S+YC P R AFKGSAPINLSDRL+QVLRWALGSVEI  SRHCP+WY YGGRLK+LERFAY NT +YP T+IPLL YCT+PAVCLLT KFI+P + N
Sbjct:  751 EIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNN 871          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.999e-54
Identity = 95/122 (77.87%), Postives = 109/122 (89.34%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-GGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFN 566
            +IGWIYGSVTEDILTGFKMH RGWRSIYCMP RPAFKGSAPINLSDRL+QVLRWALGSVEI  SRHCP+WYGY GGRLK+L+R +Y+NT +YP T++PL+ YC LPA+CLLT KFI+P + N
Sbjct:  677 EIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSN 798          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.999e-54
Identity = 95/122 (77.87%), Postives = 109/122 (89.34%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-GGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFN 566
            +IGWIYGSVTEDILTGFKMH RGWRSIYCMP RPAFKGSAPINLSDRL+QVLRWALGSVEI  SRHCP+WYGY GGRLK+L+R +Y+NT +YP T++PL+ YC LPA+CLLT KFI+P + N
Sbjct:  677 EIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSN 798          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.623e-38
Identity = 74/123 (60.16%), Postives = 99/123 (80.49%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572
            +IGWIYGSVTED++TG++MH RGWRS+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FS++  ++     RLKFL+R AY+N  IYP T+I L++YC LPA+CL + KFI+  +  H+
Sbjct:  730 RIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAMF--ATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHF 850          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 71/116 (61.21%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGWRS+YC+ KR +F+GSAPINL+DRL+QVLRWA GSVEI FSR+  I      RLKFL+R AY+N  IYP T++ L++YC LPA  L + +FI+
Sbjct:  798 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIL--ASKRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQFIV 911          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.455e-36
Identity = 69/116 (59.48%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGWRS+YC+ +R AF+G+APINL+DRL+QVLRWA GSVEI FS++  +      RLKFL+R AY+N  IYP T++ L+MYC LPA+ L + +FI+
Sbjct:  706 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL--ASRRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIV 819          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.455e-36
Identity = 69/116 (59.48%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGWRS+YC+ +R AF+G+APINL+DRL+QVLRWA GSVEI FS++  +      RLKFL+R AY+N  IYP T++ L+MYC LPA+ L + +FI+
Sbjct:  706 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL--ASRRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIV 819          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.206e-36
Identity = 70/116 (60.34%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGWRSIYC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+  I+     R+KFL+R AY N  +YP T++ L++YC LPA+ L + +FI+
Sbjct:  873 RVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAIF--ATRRMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIV 986          
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.218e-35
Identity = 68/116 (58.62%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551
            ++GWIYGSVTED++TG++MH RGW+S+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+  +      ++KFL+R AY+N  IYP T+I L++YC LPA+ L + +FI+
Sbjct:  862 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 975          
The following BLAST results are available for this feature:
BLAST of EY711380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA1_ARATH1.060e-5550.62Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA7_ORYSJ3.084e-5579.34Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ORYSJ1.999e-5477.87Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI1.999e-5477.87Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CSLD1_ARATH2.623e-3860.16Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD4_ARATH1.880e-3661.21Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD5_ORYSJ2.455e-3659.48Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI2.455e-3659.48Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD5_ARATH3.206e-3660.34Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD2_ORYSJ1.218e-3558.62Cellulose synthase-like protein D2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-007-A12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711380 ID=EY711380; Name=EY711380; organism=Citrus sinensis; type=EST; length=942bp
CACTGGTCATATCTTGTCACTATNCCGGAATTCTTACGTCGACCCACGCG
TCCGCCCACGCGTTCTCCTATTATAATTCCAGTTCATCTGTAAATAATAT
GGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCATTCTC
TTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCTTGCT
CTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTACAGG
ATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCTAAGC
GCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCTAAAC
CAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATTCTTTTCAGTCGGCA
CTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAAATTTCTTGAGAGGT
TTGCTTATGTGAACACCACTATCTATCCTCTCACTGCAATTCCTCTTCTC
ATGTATTGCACGCTGCCAGCTGTCTGTCTATTAACGAACAAGTTCATTAT
GCCTCAGGTATTTAATCATTACAATTACATCACTAGTTCACTTTTCTAAT
ATTTCAAGTTTGTGAAAATAGACTTCATACCCTAAAATTCTTTTGGTTGG
CTCATTTTCTTGCAGATTACTAACCCTTGCCAGAATAGGGTTTATTTCTC
CTCTTTCTGTCCATCTTCGCCACTGGTATTCTGGAAAAGAAGTGGAGTGC
TGTTTGGAACCATGGATGGGTGGAAAACGAACAGTTCGGGGTATTGGCCG
CGTTTCATCCCTCTATTTGCTGGTTTCCAAGGTCTCCTCAAGTACTTGCT
GGAATTGAACCCAACTCCCCTGTCCCTTCAAGCCACTCGAGGAGAACGAG
ATTTTACTGGACTCATATGGTAAATGGAAAAACCTCCTTACT
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