EY659723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.578e-32 Identity = 89/211 (42.18%), Postives = 116/211 (54.98%), Query Frame = 3 Query: 267 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVXGAEYYRITNGL--DFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRTC-*HLSDPFATTA 878 ++YGP+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELIHARWAMLGA G PE K G G EAVWFK GA + L+Y G + N+V +++L+ E YR+ G + D L+PG FDPLGLA FA LK KEI+ G L F+ G F + +G V+ HL++P A Sbjct: 35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNA 242
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.578e-32 Identity = 86/210 (40.95%), Postives = 117/210 (55.71%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGL--DFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 WYG DR ++L G S P YL+GE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G + + A+ A +++L+ E YR+ G + D ++PGG FDPLGLA FA LK KE++ G L F+ G F + +G + HL+DP A Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNA 254
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.578e-32 Identity = 88/210 (41.90%), Postives = 115/210 (54.76%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVXGAEYYRITNGL--DFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVR-TC*HLSDPFATTA 878 WYG DR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EA WFK G+ + L+Y G + +L+ ++VL+ E YRI G + D L+PGG FDPLGLA FA LK KEI+ G L F+ G F + +G + H++DP A Sbjct: 50 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNA 255
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.691e-32 Identity = 91/211 (43.13%), Postives = 113/211 (53.55%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEIVLVXGA-EYYRITNGLDFG---DKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G + + A+ A VL+ GA E YR+ G G D L+PGG FDPLGLA FA LK KE + G L F+ G F + +G + HL DP A Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGG-PLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNA 256
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.691e-32 Identity = 85/211 (40.28%), Postives = 114/211 (54.03%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGLDFG---DKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +++L+ E YR+ G D L+PGG FDPLGLA FA LK KE++ G L F+ G F + +G + HL+DP A Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 256
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.691e-32 Identity = 85/211 (40.28%), Postives = 114/211 (54.03%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGLDFG---DKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +++L+ E YR+ G D L+PGG FDPLGLA FA LK KE++ G L F+ G F + +G + HL+DP A Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 256
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.515e-32 Identity = 89/211 (42.18%), Postives = 115/211 (54.50%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGLDFG---DKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 WYGP+R +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A ++VL+ E YR+ G G D L+PGG FDPLGLA FA LK KEI+ G L F+ G F + +G + HL+DP A Sbjct: 51 WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA-GEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 256
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.515e-32 Identity = 86/210 (40.95%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGL--DFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRT-C*HLSDPFATTA 878 W+GPD +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +++L+ E YRI G + D L+PGG FDPLGLA FA LK KE++ G L F+ G F + +G + HL+DP A Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNA 217
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.591e-32 Identity = 81/184 (44.02%), Postives = 104/184 (56.52%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVXGAEYYRITNGL--DFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF 806 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I + A+ A +++L+ E YRI G + D ++PGG FDPL LA FA LK KEI+ G L F+ G F Sbjct: 29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFF 208
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.830e-32 Identity = 94/222 (42.34%), Postives = 121/222 (54.50%), Query Frame = 3 Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEIVLVXG-AEYYRITNGLD---FGDKLHPGGP-FDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF-SRLCHSEGQVRTC-*HLSDPFATTA*RISGTKKAP 908 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F++ +A E+IH RWAMLGA G + PE K+ E VWFK G+ + L+Y G + + AV+ VL+ G E +RI NGLD G+ L+PGG FDPLGLA FA LK KEI+ G L F+ G F + +G + HL DP A A + TK AP Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNA-WVFATKFAP 266 The following BLAST results are available for this feature:
BLAST of EY659723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659723 ID=EY659723; Name=EY659723; organism=Citrus sinensis; type=EST; length=912bpback to top |