EY659358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_RHOER (Propionyl-CoA carboxylase beta chain OS=Rhodococcus erythropolis GN=pccB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19 Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGNN----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 +++VTGF ++ G+ VG+I NN G L ESA K A F+ LC +PLV + ++ G++ G E G+ + GAK++ A + A VP+VT++ +G AM RA +F WPN+ ++VMG Sbjct: 271 RSIVTGFGRMAGRTVGVIANNPLRLGCLNSESAEKAARFVRLCNAFGVPLVVVVDVPGYLPGVSMEWEGVVRRGAKLLHAFAEATVPRVTVVTRKIYGGAYIAMNSRALGATAVFAWPNSEVAVMG 396
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_BOVIN (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Bos taurus GN=PCCB PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 + ++ GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A + A VPKVT+I ++G M + + + WP A I+VMG Sbjct: 338 KNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDSFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMG 464
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_HUMAN (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=PCCB PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 + ++ GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A + A VPKVT+I ++G M + + + WP A I+VMG Sbjct: 338 KNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMG 464
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_PIG (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Sus scrofa GN=PCCB PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 + ++ GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A + A VPK+T+I ++G M + + + WP A I+VMG Sbjct: 338 KNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMG 464
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_RAT (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Pccb PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 + +V GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A + A VPK+T+I ++G M + + + WP A I+VMG Sbjct: 340 KNIVIGFARMNGRTVGIVGNQPNVASGCLDINSSVKGARFVRFCDAFSIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLLGDTNYAWPTAEIAVMG 466
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_MOUSE (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Pccb PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 48 LVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 +V GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A + A VPK+T+I ++G M + + + WP A I+VMG Sbjct: 342 IVVGFARMNGRTVGIVGNQPNVASGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLLGDTNYAWPTAEIAVMG 466
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCC5_MYCTU (Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium tuberculosis GN=accD5 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 42 QTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGA 413 Q +V GF +I G+PVGI+ N G L ++ K A F+ C IP+V L ++ GF+ G+ E NGI + GAK++ A A VPK+T+I ++G M + + WP A+I+VMG + Sbjct: 335 QNIVVGFGRIDGRPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGAS 463
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCC6_MYCTU (Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium tuberculosis GN=accD6 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 45 TLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 ++V G ++ G+ VG++ NN G L ESA K A F+ LC IPLV + ++ G++ G E G+ + GAK++ A VP+VT++ ++G AM R+ + +F WP+A ++VMG Sbjct: 268 SMVVGLGRLSGRTVGVLANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKLLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG 393
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCC6_MYCBO (Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium bovis GN=accD6 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 45 TLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 407 ++V G ++ G+ VG++ NN G L ESA K A F+ LC IPLV + ++ G++ G E G+ + GAK++ A VP+VT++ ++G AM R+ + +F WP+A ++VMG Sbjct: 268 SMVVGLGRLSGRTVGVLANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKLLHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMG 393
BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_MYCLE (Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium leprae GN=accD5 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 48 LVTGFAKIFGQPVGIIGNNGILFH-----ESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGA 413 +V G +I +PVGI+ N I F ++ K A F+ +C IP+V L ++ GF+ G+ E +GI + GAK++ A A VPK+T+I ++G M + + WP A+I+VMG + Sbjct: 338 IVVGLGRIDDRPVGIVANQPIQFAGCLDINASEKAARFVRVCDCFNIPIVMLVDVPGFLPGTEQEYDGIIRRGAKLLFAYGEATVPKITVITRKAYGGAYCVMGSKNMGCDVNLAWPTAQIAVMGAS 464 The following BLAST results are available for this feature:
BLAST of EY659358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659358 ID=EY659358; Name=EY659358; organism=Citrus sinensis; type=EST; length=846bpback to top |