EY659357

Overview
NameEY659357
Unique NameEY659357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6052 contig Csv1_Contig6052:357..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.825e-67
Identity = 132/200 (66.00%), Postives = 153/200 (76.50%), Query Frame = 2
Query:  242 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPL-MHHIFSKLEVILLFLSRKLHRFTCSAGAVFQSEVK 838
            V +EPHRHEGVFIA+GKEDALVT+N V G  VY EKRISV+  +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRD  ++AKKRTN+IPII DARHP  YRMLVGMVD IF+DVA PDQ RI+ L   H        ++ +       T    AVF +EVK
Sbjct:  111 VTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVK 309          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.058e-67
Identity = 127/208 (61.06%), Postives = 159/208 (76.44%), Query Frame = 2
Query:  236 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLE-VILLFLSRKLHRFTCSAGAVFQSEVK 838
            +KVV+EPHRH GVFIA+GKED LVT+N+  GE+VY EKRIS++    E+G   TK+EYR+WNPFRSKLAA ++GG+D + I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+   MAKKR NVIPII DARHP  YRML+GMVD +F+DVA PDQARI+ L  H+F K +  +++ +       T  A  VF  EV+
Sbjct:   86 AKVVIEPHRHAGVFIARGKEDLLVTRNIAPGESVYGEKRISIEEPSKEEGAAPTKIEYRVWNPFRSKLAAGIMGGIDELGIAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFAREVQ 293          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.058e-67
Identity = 129/208 (62.02%), Postives = 161/208 (77.40%), Query Frame = 2
Query:  236 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQ---NEDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLE-VILLFLSRKLHRFTCSAGAVFQSEVK 838
            +KVV+EPH+H GVFIA+GKED LVTKN+  GE+VY EKRISV+   +E+G   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+   MAKKR NVIPII DARHP  YRML+GMVD +F+DVA PDQARI+ L  H+F K +  +++ +       T  A  VF  EV+
Sbjct:   85 AKVVIEPHKHAGVFIARGKEDLLVTKNVAPGESVYGEKRISVEEPASEEGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQ 292          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.018e-66
Identity = 131/200 (65.50%), Postives = 156/200 (78.00%), Query Frame = 2
Query:  242 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVK 838
            V VEPHRHEGVFI +G EDALVT N+V G +VY EKR++V  E+G K EYR WNPFRSKLAAA+LGGVD I IKP  +VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRD  ++AKKRTN+IP++ DARHP  YRML+GMVD IF+DVA PDQ+RI+ L  H F +     L+ +       T SA AVF SEV+
Sbjct:   80 VSVEPHRHEGVFIYRGAEDALVTLNMVPGVSVYGEKRVTVM-ENGEKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVR 278          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.018e-66
Identity = 130/200 (65.00%), Postives = 156/200 (78.00%), Query Frame = 2
Query:  242 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVK 838
            V VEPHRHEGVFI +G EDALVT N+V G++VY E+R++V  E G K EYR WNPFRSKLAAA+LGGVD I IKP  +VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRD  ++AKKRTN+IP++ DARHP  YRML+GMVD IF+DVA PDQ+RI+ L  H F +     L+ +       T SA AVF SEV+
Sbjct:   98 VSVEPHRHEGVFIYRGAEDALVTLNMVPGQSVYGERRVTV-TEGGVKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVR 296          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 1.035e-65
Identity = 118/172 (68.60%), Postives = 142/172 (82.56%), Query Frame = 2
Query:  239 KVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSK 754
            K ++  HR EGVFI KG+++ALVTKN   GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG +VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRD  +MAKKRTNV+PII DAR P  YR LVGMVD +F+DVA PDQARI+ +    F K
Sbjct:   64 KTIIVKHRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLK 234          

HSP 2 Score: 29.6462 bits (65), Expect = 1.035e-65
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +  YFLK GGHF+ISIK
Sbjct:  228 NCQYFLKNGGHFLISIK 244          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.478e-65
Identity = 132/202 (65.35%), Postives = 150/202 (74.26%), Query Frame = 2
Query:  236 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVK 838
            SKV+V PHRH GVF+AK K DALVTKNLV GE +YNEKRI VQNED + VEYR+WNP RSKLA A+  GVDNIWIKPGV+VLYLGA+SG TVSHVSDIVGP G VYAVE S   G+   +MA+KRTNVIPII DARHPA YRMLVGMVD IFSDV  P+QA IL L    F K     ++ +       T +A  V+Q EV+
Sbjct:   57 SKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVE 258          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.222e-64
Identity = 130/210 (61.90%), Postives = 155/210 (73.81%), Query Frame = 2
Query:  242 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEV-KTCNRSFQPL 865
            VVVEPHR  GVFI KGKEDAL TKN+V GE+VY EKR+SV +  G+ +EYR+WNPFRSKLAA+++GG++N  IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRD   +AKKR NV+PI+ DARHP  YRMLVGMVD IFSDVA PDQARI+ L    F +     ++ +       T    AVF  EV K     F+PL
Sbjct:  117 VVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGS-IEYRVWNPFRSKLAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPL 325          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.036e-62
Identity = 130/208 (62.50%), Postives = 157/208 (75.48%), Query Frame = 2
Query:  239 KVVVEPHRHEGVFIAKG-KEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVK 838
            KV+VEPHRH+GVF+A+G KED L T NLV GE+VY EKRISV+N   E+G   TK EYRIWNPFRSKLAA +LGG++ I++KPG +VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRD  +MA +RTNVIPI+ DAR P  YRML+ MVD IF+DVA PDQARI+ +   +F K    +L+ +       T     VF SEV+
Sbjct:   79 KVIVEPHRHKGVFVARGGKEDLLATVNLVPGESVYGEKRISVENASKEEGGASTKTEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQ 286          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.162e-61
Identity = 117/176 (66.48%), Postives = 136/176 (77.27%), Query Frame = 2
Query:  236 SKVVVEPH-RHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLE 760
            +KV+VE H RHEGVFI +GKE++L T N V GE+VY EKR+SV  E   K EYRIWNPFRSK+AA +  GVD I IKPG +VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRD   MAKKRTNVIPII DARHP  YRML+GMVD +F+DVA P+QA+I+      F K E
Sbjct:   95 AKVIVEKHPRHEGVFIVRGKEESLATLNSVPGESVYGEKRVSV-GEGEDKKEYRIWNPFRSKIAAGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNE 269          

HSP 2 Score: 28.1054 bits (61), Expect = 7.162e-61
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +++YFLK  GHF+ISIK
Sbjct:  261 NSAYFLKNEGHFIISIK 277          
The following BLAST results are available for this feature:
BLAST of EY659357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBRL_DROME1.825e-6766.00rRNA 2'-O-methyltransferase fibrillarin OS=Drosoph... [more]
FBRL_DEBHA9.058e-6761.06rRNA 2'-O-methyltransferase fibrillarin OS=Debaryo... [more]
FBRL_ASHGO9.058e-6762.02rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya ... [more]
FBLL1_MOUSE2.018e-6665.50rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBLL1_HUMAN2.018e-6665.00rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBRL_TETTH1.035e-6568.60rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahy... [more]
FBRL3_ARATH8.478e-6565.35Putative rRNA 2'-O-methyltransferase fibrillarin 3... [more]
FBRL_CAEEL3.222e-6461.90rRNA 2'-O-methyltransferase fibrillarin OS=Caenorh... [more]
FBRL_NEUCR1.036e-6262.50rRNA 2'-O-methyltransferase fibrillarin OS=Neurosp... [more]
FBRL_DICDI7.162e-6166.48rRNA 2'-O-methyltransferase fibrillarin OS=Dictyos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659357 ID=EY659357; Name=EY659357; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGCTTTGTAGCCGGACAGAGCATCAAACATGAGACCTCCAA
GAGGACGCGGTGGTGGCGGTGGGTTCAGGGGAGGCAGAGGTGATGGAGGA
GGAAGAGGAAGAGGTGGCGGCCGAGGTGGTGGAGGTGGAAGAGGTGGTGG
TAGCGCTATGAGAGGCCGAGGTGGCGGTCGTGGCGGTGGCCGAGGTGGAG
GAAGAGGACGCGGTGGTGGAGGAATGAAGGGTGGAAGCAAGGTTGTAGTT
GAGCCTCATAGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAGACGC
CCTTGTCACTAAGAATCTCGTCGCCGGTGAGGCTGTCTACAATGAGAAGA
GGATCTCCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAATTTGG
AATCCCTTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTGATAA
TATTTGGATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTTCCG
GCACAACTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTAGTT
TATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTTGGTCATATGGC
AAAGAAGAGAACCAATGTTATACCCATAATTNGAGATGCTAGACATCCTG
CCNAGTACCGTATGTTGGTCGGTATGGTAGATTGTATATTTTCTGACGTT
GCCCCACCGGATCAGGCGAGGATTTTACCCCTGATGCATCATATTTTCTC
AAAGCTGGAGGTCATTTTGTTATTTCTATCAAGGAAACTGCATAGATTCA
CCTGTTCTGCTGGAGCAGTGTTCCAGAGTGAAGTTAAGACCTGCAACAGG
TCATTCCAACCCTTGAGCA
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