EY659345

Overview
NameEY659345
Unique NameEY659345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig610 contig Csv1_Contig610:258..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659345 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSI (Sucrose transport protein 2 OS=Oryza sativa subsp. indica GN=SUT2M PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.000e-50
Identity = 109/283 (38.52%), Postives = 159/283 (56.18%), Query Frame = 1
Query:   13 ISGMIVQPIVGFHSDT---CKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHSAGDSVTD-SVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNKKTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCXXXXXXXXXXXXXXXXXYVTEQRLEEIDDKETAPSTKDPFFSEIFGALKGLQKPMWILLAVTALNWIAWFPFLVFDTDWMXEGGVXREL*GQCKGAEGV*QRGESGV----XGADAYAIVLGFTSLGVE 837
            +SG++VQP+VG  SD      S  GRRRP                 ++AD+G   GDS+T  S +  AII++++GFW+LDV NN  QGPCRA LADL+ +  ++TR AN++FS FMA+GN+LGYA G+Y+  Y + PFT + +C + CANLK+                   V E +    D+ +   + ++ F  E+FG+ +    P+W++L VTAL WI WFPF++FDTDWM      RE+         + Q    GV     G    +++LGFTS+ +E
Sbjct:   71 LSGLLVQPLVGHLSDRIAPAASPLGRRRPFIAAGAASIAAAVLTVGFSADLGRIFGDSITPGSTRLGAIIVYLVGFWLLDVGNNATQGPCRAFLADLTENDPRRTRIANAYFSLFMALGNILGYATGAYSGWYKIFPFTVTPSCSISCANLKSAFLLDIIILVVTTCITVASVQEPQSLGSDEADHPSTEQEAFLWELFGSFRYFTLPVWMVLIVTALTWIGWFPFILFDTDWM-----GREIYRGSPDDPSITQSYHDGVRMGSFGLMLNSVLLGFTSIVLE 348          
BLAST of EY659345 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.575e-32
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 1
Query:   13 ISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHSAGDS-----VTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNKKTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLK 456
            I+G++VQP VG  SD C S++GRRRP                 ++ADIG+  GDS          +TRA ++F+IGFW+LD+ANNT+QGP RALLADLSG   +   TAN+ F  +MA+GN+LG++AG+        PF  S+AC   C NLK
Sbjct:  107 ITGLVVQPFVGIWSDKCTSKYGRRRPFILVGSFMISIAVIIIGFSADIGYLLGDSKEHCSTFKGTRTRAAVVFIIGFWLLDLANNTVQGPARALLADLSGPDQR--NTANAVFCLWMAIGNILGFSAGASGKWQEWFPFLTSRACCAACGNLK 257          
BLAST of EY659345 vs. ExPASy Swiss-Prot
Match: SUT1_SCHPO (General alpha-glucoside permease OS=Schizosaccharomyces pombe GN=sut1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13
Identity = 59/230 (25.65%), Postives = 97/230 (42.17%), Query Frame = 1
Query:   13 ISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHSAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNKKTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCXXXXXXXXXXXXXXXXXYVTEQRLEEIDDKETAPSTKDPFFSEIFGALKGLQKPMWILLAVTALNWIAWFPFLVFDTDWM 702
            ++G+++QPI G  SD   SR GRRRP                 +A DI      +    +K   I++  I  ++LDVA N +    R+L+ D   S  +    ANS+    + VGNVLGY  G Y  LY +  F       V+C                       +V+E+R   ++ +++       FF+ +  ++  L   +  +  V    +  WFPFL + T ++
Sbjct:   80 LTGILIQPIAGILSDRVNSRIGRRRPFMLCASLLGTFSLFLMGWAPDICLFIFSNEV-LMKRVTIVLATISIYLLDVAVNVVMASTRSLIVDSVRSDQQ--HEANSWAGRMIGVGNVLGYLLG-YLPLYRIFSFLNFTQLQVFCV-------LASISLVLTVTITTIFVSERRFPPVEHEKSVAGEIFEFFTTMRQSITALPFTLKRICFVQFFAYFGWFPFLFYITTYV 298          
The following BLAST results are available for this feature:
BLAST of EY659345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SUT2_ORYSI1.000e-5038.52Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUC3_ARATH3.575e-3245.75Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]
SUT1_SCHPO1.668e-1325.65General alpha-glucoside permease OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659345 ID=EY659345; Name=EY659345; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGCATCTCCGGCATGATCGTCCAGCCCATCGTCGGCTTCCA
CAGCGACACCTGCAAATCCCGCTTCGGCCGTCGCCGCCCCTTCATTCTCG
CCGGCGCCGTCCTCGTCGCCATCGCTGTGTTTCTCATCGGCTACGCCGCC
GACATAGGCCACTCCGCGGGCGACTCCGTTACCGATTCCGTCAAAACCCG
CGCCATCATCATCTTCGTCATCGGCTTCTGGATTCTCGACGTTGCGAATA
ACACATTACAAGGCCCATGCAGAGCCCTCCTCGCCGATCTCTCCGGCAGC
AGCAACAAGAAAACAAGAACCGCAAACTCTTTTTTCTCCTTCTTCATGGC
CGTCGGTAACGTGCTTGGCTATGCCGCCGGCTCCTACACTCACTTGTACC
ACATGCTTCCGTTCACAAAGTCAAAAGCTTGCGACGTTTACTGTGCAAAT
TTGAAAACGTGCTTCTTCCTCTCCATAGCTCTGCTAATAACCCTAACGAC
AATAGCACTGTTTTACGTAACTGAGCAAAGATTAGAAGAGATTGATGATA
AAGAAACGGCGCCGTCCACGAAGGATCCATTTTTCAGCGAGATATTTGGT
GCATTGAAAGGGTTGCAAAAGCCTATGTGGATCCTACTTGCGGTGACAGC
GTTGAACTGGATTGCATGGTTCCCGTTCTTGGTGTTCGACACTGATTGGA
TGGNNGAGGGAGGTGTACNGAGGGAACTCTAAGGNCAGTGCAAAGGAGCT
GAGGGTGTATAACAACGGGGTGAGAGCGGGGTCNTTGGGGCTGATGCTTA
CGCTATCGTTCTGGGGTTCACGTCCCTGGGTGTGGAGTCTTGGCGAACTG
ATTGTTGCGTCAGAGCTCTTGGGCGTGGCATTTCTGGTGCGGTTCTTTGC
TTCCCTTTTGATACAAATGCCGAGC
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