EY659272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: RECQ1_MOUSE (ATP-dependent DNA helicase Q1 OS=Mus musculus GN=Recql PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.168e-18 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 433 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEV----AETIRLIQVGAIKVLFVSPER 759 +L+ V+ FR QLE I + + +K LV+PTG GKSLCYQ+PA+ G TLV+CPL++LM DQL L + I L++S E V AE + + +K+++V+PE+ Sbjct: 82 VLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVN--KNSQLKLIYVTPEK 193 HSP 2 Score: 30.8018 bits (68), Expect = 4.168e-18 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 812 VGGDEAHCVSEWAHNFPPLY 871 V DE HC S+W H+F P Y Sbjct: 216 VAVDEVHCCSQWGHDFRPDY 235
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: RECQ1_HUMAN (ATP-dependent DNA helicase Q1 OS=Homo sapiens GN=RECQL PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 5.420e-18 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 433 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEV----AETIRLIQVGAIKVLFVSPER 759 +L+ V+ + FR QLE I + + K LV+PTG GKSLCYQ+PA+ G TLV+CPL++LM DQL L + I L++S E V AE + + +K+++V+PE+ Sbjct: 82 ILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVN--KNSELKLIYVTPEK 193 HSP 2 Score: 30.4166 bits (67), Expect = 5.420e-18 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 821 DEAHCVSEWAHNFPPLY 871 DE HC S+W H+F P Y Sbjct: 219 DEVHCCSQWGHDFRPDY 235
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: SGS1_YEAST (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae GN=SGS1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 9.017e-18 Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 412 SNENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMI----LPGLTLVVCPLVALMIDQLRH-LPPVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 S+E L RL V+ FR QLEA+ L K +++PTG GKSLCYQ+PA++ G T+V+ PL++LM DQ+ H L I SS E+ +T L G + ++++SPE Sbjct: 663 SDEVLYRLHE-VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLDLVYISPE 781 HSP 2 Score: 33.113 bits (74), Expect = 9.017e-18 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 821 DEAHCVSEWAHNFPPLY 871 DEAHCVS W H+F P Y Sbjct: 808 DEAHCVSNWGHDFRPDY 824
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_DROME (Bloom syndrome protein homolog OS=Drosophila melanogaster GN=mus309 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.523e-17 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 253 SKKKLNKNETESKGAEDEYGLIIENLEQNQKNRRAAGELE--LVEDAVRAVKDEASNENLGRL---LRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 S+ NK+ S G ++ +++ +G + D + D E+ RL L +G SFR QL+ I L +++PTG GKSLCYQ+PA++ G+T+V+ PL +L+ DQ+ L + I LS Q+ +V R + Q +K+L+V+PE+ Sbjct: 663 SQAAANKSRVSSAGPSTSKSVVPTKQTSALHSQKLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEK 839 HSP 2 Score: 33.8834 bits (76), Expect = 1.523e-17 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 821 DEAHCVSEWAHNFPPLY 871 DEAHCVS+W H+F P Y Sbjct: 865 DEAHCVSQWGHDFRPDY 881
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: RECS_BACSU (Probable ATP-dependent DNA helicase recS OS=Bacillus subtilis GN=recS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.557e-17 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 424 LGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 L + L +G+ SF+ GQ + I+ +L K T+ +LPTG GKSLCYQ+P +L G+ L+V PL++LM DQ++ L + + L + K L++SPE Sbjct: 4 LQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHRYKFLYLSPE 114 HSP 2 Score: 36.1946 bits (82), Expect = 1.557e-17 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNFPPLY 871 ISL DEAHC+SEW H+F P Y Sbjct: 130 ISLFVIDEAHCISEWGHDFRPDY 152
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_XENLA (Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.578e-17 Identity = 41/118 (34.75%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 415 NENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 ++ + ++ +G FR QLEAI L + +++PTG GKSLCYQ+P I PG+T+V+ PL +L++DQ++ L + I +L+ + E A + + IK+L+V+PE+ Sbjct: 604 SKEMMKIFHKKFGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDAEAASIYLQLSKKDPIIKLLYVTPEK 721 HSP 2 Score: 34.2686 bits (77), Expect = 2.578e-17 Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 2 Query: 782 NIYCYFIISLVGGDEAHCVSEWAHNFPPLY 871 N+Y +++ DEAHCVS+W H+F P Y Sbjct: 734 NLYERQLLARFVIDEAHCVSQWGHDFRPDY 763
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: RECQ1_PONAB (ATP-dependent DNA helicase Q1 OS=Pongo abelii GN=RECQL PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.402e-17 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 433 LLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEV----AETIRLIQVGAIKVLFVSPER 759 +L+ V+ FR QLE I + + K LV+PTG GK LCYQ+PA+ G TLV+CPL++LM DQL L + I L++S E V AE + + +K+++V+PE+ Sbjct: 82 VLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKGLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVN--KNSELKLIYVTPEK 193 HSP 2 Score: 30.4166 bits (67), Expect = 3.402e-17 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 821 DEAHCVSEWAHNFPPLY 871 DE HC S+W H+F P Y Sbjct: 219 DEVHCCSQWGHDFRPDY 235
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: HUS2_SCHPO (ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe GN=rqh1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.664e-17 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 412 SNENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMI----LPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLIQVG--AIKVLFVSPE 756 S E LG L+ + FR QLEAI L K +++PTG GKSLCYQ+PA+I G+TLV+ PL++LM DQL HL + I LS Q +E + I + +K+L+V+PE Sbjct: 504 SKEVLG-CLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEGGASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLLYVTPE 624 HSP 2 Score: 33.4982 bits (75), Expect = 5.664e-17 Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 2 Query: 770 QIFCNIYCYFIISLVGGDEAHCVSEWAHNFPPLY 871 ++ ++Y +++ + DEAHCVS W H+F P Y Sbjct: 634 RVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDY 667
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_MOUSE (Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.557e-17 Identity = 41/107 (38.32%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 448 YGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 +G +FR QLEAI L + +++PTG GKSLCYQ+PA + PG+T+V+ PL +L++DQ++ L I +L+ + E A + + IK+L+V+PE+ Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEK 777 HSP 2 Score: 31.187 bits (69), Expect = 9.557e-17 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 782 NIYCYFIISLVGGDEAHCVSEWAHNF 859 N+Y +++ DEAHCVS+W H+F Sbjct: 790 NLYERKLLARFVIDEAHCVSQWGHDF 815
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_CHICK (Bloom syndrome protein homolog (Fragment) OS=Gallus gallus GN=BLM PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.598e-17 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 391 RAVKDEASNENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 R +K S E L ++ +G SFR QLEAI L + +++PTG GKSLCYQ+PA + G+T+V+ PL +L+IDQ++ L + I +L+ + ++T + + IK+L+V+PE+ Sbjct: 375 RGMKFSHSEEML-KIFHRKFGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIIDQVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEK 499 HSP 2 Score: 31.5722 bits (70), Expect = 9.598e-17 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 782 NIYCYFIISLVGGDEAHCVSEWAHNF 859 N+Y +++ DEAHCVS+W H+F Sbjct: 512 NLYDRKLLARFVIDEAHCVSQWGHDF 537 The following BLAST results are available for this feature:
BLAST of EY659272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659272 ID=EY659272; Name=EY659272; organism=Citrus sinensis; type=EST; length=924bpback to top |