EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.662e-26
Identity = 82/205 (40.00%), Postives = 119/205 (58.05%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE-TGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            A  P +D   +  P     L+A G AVGLP E  MGNSEVGH  +G+GRI  Q    +  A+A G  +++E       + + TG+ LHL+GLLSDGGVHS ++ L+ LL+ A +   + + +H   DGRDV   S   F+E  EK +AE+   GV  +IA+  GR Y  MDR +N W+ V+  ++A VLG+  T+ +A   + K+
Sbjct:   28 AKKPNLDKLFEKYPTSQ--LQASGLAVGLP-EGQMGNSEVGHLNIGSGRIVYQELTRITKAIADGDFFENESLKLAMTNAKKTGSSLHLMGLLSDGGVHSHIEHLRGLLEFAKKEEVQNVYVHAFMDGRDVPPSSGQEFIEKTEKMMAEV---GV-GKIATVSGR-YYAMDR-DNRWERVELAYNALVLGKGETASSATQAIEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYXXD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Myxococcus xanthus (strain DK 1622) GN=gpmI PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.271e-26
Identity = 77/192 (40.10%), Postives = 105/192 (54.69%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLG 576
            V A TP +D    ++P  +  L+  G AVGLP E  MGNSEVGH  +GAGRI  Q    ++ A  SG++ Q+          +     LHL+GL+S GGVHS +D L  LLK A ER    + +H   DGRD    S++G+VE +E+ L E        +IA+  GR Y  MDR +  WD V + ++A V G
Sbjct:   27 VLAGTPHLDKL--ASPYPFTELQTAGLAVGLP-EGQMGNSEVGHTNIGAGRIVYQDLVRINRAAESGELAQNPVLRAALDGVKADGKALHLLGLVSPGGVHSSMDHLFALLKAAKERNVAHVYVHAFLDGRDTPPQSALGYVEELERFLHETH----TGRIATVTGRFY-AMDR-DKRWDRVHQAYEALVFG 209          

HSP 2 Score: 26.5646 bits (57), Expect = 9.271e-26
Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = 3
Query:  645 DQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            D+++   V+   +G  VG I  GDA + FNF
Sbjct:  231 DEFVKPTVLAAGDGTPVGRIQDGDAVIFFNF 261          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACME (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus megaterium GN=gpmI PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 9.272e-26
Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A  P  D F    P     L+A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  Q+E     +K + E GT LHL GLLSDGGVHS ++ L  LL+ A   G +++ +H   DGRDV   S+  +++ + + + E    GV  +IA+  GR Y +MDR +  W+ V++ + A V GE  +  +A
Sbjct:   28 AKKPNFDRFWNEYPHA--TLQASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFEQNETLLAAVKHAKEKGTNLHLFGLLSDGGVHSHIEHLYALLRLAKSEGLEKVYIHGFLDGRDVAPQSAETYLKELNEKIEEY---GV-GEIATLSGR-YYSMDR-DKRWERVEKSYRAMVYGEGPSYTSA 216          

HSP 2 Score: 25.7942 bits (55), Expect = 9.272e-26
Identity = 16/49 (32.65%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  591 FNSAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            + SA E VK   +     D+++   VI  E+G  V  I   DA + +NF
Sbjct:  213 YTSAEECVKDSYDN-GIYDEFVLPSVITKEDGSPVATIQDEDAVIFYNF 260          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_LISIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria innocua GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.131e-25
Identity = 78/205 (38.05%), Postives = 113/205 (55.12%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSK 618
            +A+ P  D +  + P     L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +D A+  G+  +++  N  +         LHL GLLSDGGVHS ++ L  LL+ A ++G K + +H   DGRDV   SS+ ++ET+EK +++L        IA+  GR Y  MDR +  W+ V++ + A V  E       P++L K
Sbjct:   27 QANKPNFDRYWANFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLEKAISDLN----YGAIATVSGRFY-AMDR-DKRWERVEKAYKAIVSAEGE-KFEDPIELVK 221          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.131e-25
Identity = 81/199 (40.70%), Postives = 107/199 (53.77%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAP 603
            V ADTP  D    + P    LL A G  VGLP +  MGNSEVGH  LGAGR+  Q    VD A+  G + ++           +  LHL+GL+SDGGVHS ++ L  ++K A E G + I +H +TDGRD    S VGF+  +E+ +     +   A+IA+  GR Y  MDR +  WD  K  WDA VLG       +P
Sbjct:   33 VLADTPFTDYLLANYPHS--LLGASGEDVGLP-DGQMGNSEVGHLNLGAGRVVFQDLCRVDNAIKDGSMGENAVLKTAFSQAASSRLHLLGLVSDGGVHSHINHLIGIVKYAYEAGVRDICIHAITDGRDCSPTSGVGFIRQLEEAV-----RPYGAKIATVVGRFY-AMDR-DKRWDRNKLAWDAIVLGRGEQCSCSP 221          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLONN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium novyi (strain NT) GN=gpmI PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.207e-25
Identity = 74/199 (37.19%), Postives = 114/199 (57.29%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAP 603
            A  P +D   K  P    +L A G +VGLP +  MGNSEVGH  +GAGRI  Q    +  ++  G I+++E       + +     +H +GLLSDGGVHS +D L+ L+  A++ G K++ +H   DGRD    S++ ++E +EK +AE+   GV   IA+  GR Y  MDR +  W+ ++  ++A VLG+   + T+P
Sbjct:   28 AKKPNLDKIFKEYPHT--VLGASGLSVGLP-DGQMGNSEVGHLNIGAGRIVYQALTRITKSIEDGDIFKNEALLKAIDNAKNNDSAIHFMGLLSDGGVHSHIDHLKGLIDFAAKSGVKKVYVHAFLDGRDTAPKSALTYIEDLEKHMAEV---GV-GSIATVSGR-YYAMDR-DKRWERIELAYNAMVLGKGEVA-TSP 216          

HSP 2 Score: 26.5646 bits (57), Expect = 1.207e-25
Identity = 15/47 (31.91%), Postives = 25/47 (53.19%), Query Frame = 3
Query:  597 SAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            S  EAV++       ++  LP   +++++GK V  I   D+ V FNF
Sbjct:  215 SPKEAVERSYHDNKTDEFVLP--TVIEKDGKPVATIKSNDSVVFFNF 259          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_LISW6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSK 618
            L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +D A+  G+  +++  N  +         LHL GLLSDGGVHS ++ L  LL+ A ++G K + +H   DGRDV   SS+ ++ET++K + +L       +IA+  GR Y  MDR +  W+ V++ + A V  E       P++L K
Sbjct:   45 LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAMNDLN----YGEIATVSGRFY-AMDR-DKRWERVEKAYKAIVSAEGE-KFEDPIELVK 221          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_LISMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSK 618
            L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +D A+  G+  +++  N  +         LHL GLLSDGGVHS ++ L  LL+ A ++G K + +H   DGRDV   SS+ ++ET++K +++L        IA+  GR Y  MDR +  W+ V++ + A V  E       P++L K
Sbjct:   45 LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAISDLN----YGAIATVSGRFY-AMDR-DKRWERVEKAYKAIVSAEGE-KFEDPIELVK 221          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_LISMF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.292e-25
Identity = 77/205 (37.56%), Postives = 113/205 (55.12%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSK 618
            +A+ P  D +  + P     L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +D A+  G+  +++  N  +         LHL GLLSDGGVHS ++ L  LL+ A ++G K + +H   DGRDV   SS+ ++ET++K +++L        IA+  GR Y  MDR +  W+ V++ + A V  E       P++L K
Sbjct:   27 QANKPNFDRYWANFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAISDLN----YGAIATVSGRFY-AMDR-DKRWERVEKAYKAIVNAEGE-KFEDPIELVK 221          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.462e-25
Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD-EGFNYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A  P +D   K  P  +    A G AVGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  +++ +    ++   +  T LHL GLLSDGGVHS +  L  LL+ A   G + + +H   DGRD    S   F+E +E  +AEL   GV  +IAS  GR YV MDR +N WD V++ + A V GE
Sbjct:   28 AKKPVLDKLMKDYP--FVKGNASGMAVGLP-EGQMGNSEVGHLNMGAGRIVYQELTRITKEIQDGDFFENTQLIKAVENCKKNNTALHLFGLLSDGGVHSHITHLYGLLELAKRHGLENVYVHAFLDGRDTAPTSGKSFMEALEAKMAEL---GV-GRIASVTGRYYV-MDR-DNRWDRVEKAYAALVDGE 209          

HSP 2 Score: 30.8018 bits (68), Expect = 3.462e-25
Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 3
Query:  597 SAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            +AVEAV     +   ND+++   V+V ++GKA+ PI   D+ + FNF
Sbjct:  215 NAVEAVAASYAE-GVNDEFVLPTVVV-KDGKAIAPIKANDSIIFFNF 259          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_CLOB88.662e-2640.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYXXD9.271e-2640.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACME9.272e-2640.402,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISIN1.131e-2538.052,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM81.131e-2540.702,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLONN1.207e-2537.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISW63.292e-2539.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMO3.292e-2539.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMF3.292e-2537.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPH3.462e-2541.362,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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