EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI1_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 71/192 (36.98%), Postives = 103/192 (53.65%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A TP +D   +  P  W  L A G AVGLP E  MGNSEVGH  +GAGRI  Q    ++ ++  G  +++  F            +LHL+GL+S GGVHS +  +  L+K A + G K++ +H   DGRDV   +++  +E ++    E      +A+IA+  GR Y  MDR +  WD  K  +DA  +G A
Sbjct:   33 ARTPNLDHLIEEYP--WCFLEASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQDLTRINFSIRKGDFFKNPAFLGAISNAKANDSSLHLMGLVSYGGVHSYMAHIHALIKLAQQEGVKKVYIHAFLDGRDVPPKAALKDIEELDAFCKE----NGNAKIATISGR-YYAMDR-DKRWDRTKLAYDALTMGVA 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PROMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.529e-22
Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            ADTP MD+  ++ P    L+ A G+ VGLP ++ MGNSEVGH  +GAGRI  Q    +   + S K+ Q     N      ET  TLHL+GL SDGGVHS ++ L  LL+ A  +G +++ +H  TDGRD    SS+ +++ I K+  E+ G G   ++A+  GR Y +MDR +N W+ +++
Sbjct:   40 ADTPVMDALWQAYPHT--LIEASGADVGLP-DNQMGNSEVGHLTIGAGRIIQQELVRISNTIRSKKLDQITNLSNLANKLIETDKTLHLVGLCSDGGVHSHINHLCGLLEWAKNKGIQKVAVHAFTDGRDTPAKSSLQYLKII-KEKFEVLGIG---ELATLCGR-YWSMDR-DNRWERIEK 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mobile GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.529e-22
Identity = 70/174 (40.23%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDE----GFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            A TP  D      P    +++A G  VGLP +D MGNSEVGH  +GAG+I   G  L++  +   K  Q+      FN +K + ET TLHL+GLLSDGGVHS  + L  L++ A E G K + +H+  DGRDV   S +  ++ +E        K  +  I S  GR Y  MDR
Sbjct:   27 AKTPNFDKLFNEYPNS--VIQASGDYVGLP-DDQMGNSEVGHLNIGAGQIVYTGLSLINKDIKDNKFKQNAKFIAAFNAVKKNNETNTLHLMGLLSDGGVHSHEEHLFKLIEAAHENGLKNVSVHVFGDGRDVAPRSILTSIKKLEAIT-----KKYNYAIGSIMGRFY-AMDR 191          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HELHP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter hepaticus GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.529e-22
Identity = 71/195 (36.41%), Postives = 112/195 (57.44%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLT 597
            A  PT D   K+ P  + ++   G +VGLP +  MGNSEVGH  +G+GR+  Q    +  A+   +I  +     ++ + ++  +HL GLLSDGGVHS +  L+ L +  S +G KR+ LH++TDGRDVL  S++ ++  IE    +      +  IAS  GR Y  MDR +  WD V++ +++  LG+  T+L+
Sbjct:   25 AKKPTYDYLFKNVP--YGMIDTFGLSVGLP-QGQMGNSEVGHMCIGSGRVLYQDLVRISRAIEYDEIKDNPAL--VEVTQQSAVVHLCGLLSDGGVHSHIVHLKALAQILSTQG-KRVYLHLITDGRDVLPKSALNYLADIESICED------NVSIASVSGRFY-AMDR-DKRWDRVQKAYESIALGKNPTNLS 205          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CHLSY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.922e-22
Identity = 78/207 (37.68%), Postives = 112/207 (54.11%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQV--LGEAHTSLTAPLKLS 615
            ADTP +D++  + P  +  L A G  VGLP E  +GNSEVGH  +GAG +  Q    +  A+A G  + +    +   ++K       LHL+GL   GGVH+  D L  LL+ A     +R+ LH+  DGRDVL  S++GF++T+E  +A L G G    IA+  GR Y  MDR +  W+   R + A V  +GE   S  A ++ S
Sbjct:   29 ADTPHVDAWMANCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQ--RNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARL-GVGT---IATVSGR-YYAMDR-DKRWERTGRAYAALVDGVGEKAPSARAAIEAS 224          

HSP 2 Score: 23.0978 bits (48), Expect = 1.922e-22
Identity = 10/34 (29.41%), Postives = 19/34 (55.88%), Query Frame = 3
Query:  636 NANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            + +D+++   VIV  +G+    +  GDA +  NF
Sbjct:  228 DVSDEFVLPTVIVTASGEPTATVRDGDAVIFTNF 261          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.922e-22
Identity = 78/207 (37.68%), Postives = 112/207 (54.11%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQV--LGEAHTSLTAPLKLS 615
            ADTP +D++  + P  +  L A G  VGLP E  +GNSEVGH  +GAG +  Q    +  A+A G  + +    +   ++K       LHL+GL   GGVH+  D L  LL+ A     +R+ LH+  DGRDVL  S++GF++T+E  +A L G G    IA+  GR Y  MDR +  W+   R + A V  +GE   S  A ++ S
Sbjct:   29 ADTPHVDAWMANCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQ--RNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARL-GVGT---IATVSGR-YYAMDR-DKRWERTGRAYAALVDGVGEKAPSARAAIEAS 224          

HSP 2 Score: 23.0978 bits (48), Expect = 1.922e-22
Identity = 10/34 (29.41%), Postives = 19/34 (55.88%), Query Frame = 3
Query:  636 NANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            + +D+++   VIV  +G+    +  GDA +  NF
Sbjct:  228 DVSDEFVLPTVIVTASGEPTATVRDGDAVIFTNF 261          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens GN=gpmI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.997e-22
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A  LGE   + +A   + K+
Sbjct:   45 LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKDFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMALGEGEKASSAVEAIEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.608e-22
Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKP-SFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAP 603
            A TP +D   K  P  W  L+A G AVGLP +  MGNSEVGH  +GAGRI  Q    +++++ +G  +++  F N I        +LHL+GL S GG+HS +  L  LLK   E+  K++ +H   DGRD    +++G ++ ++    E      +A+IA+  GR Y  MDR +  WD  K  +DA   G A    TAP
Sbjct:   30 ARTPNLDRLEKECP--WCFLKASGEAVGLP-KGMMGNSEVGHLTIGAGRIVNQDLTRINISIKNGDFFKNPVFLNAISNVKANASSLHLMGLASCGGIHSYMPHLHALLKLVQEKDLKKVYIHAFLDGRDEPPKAALGDIKKLDAFCKE----HGNAKIATVSGR-YYAMDR-DKRWDRTKLAYDALTRGVA--PYTAP 217          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.255e-22
Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP ++S     P  W  L   G AVGLP E  MGNSEVGH  +GAGR+  Q    ++L++ +G  +++    +  + +K      +LHL+GL+S GGVHS +  L  L+K A ++G K++ +H   DGRDV   +++  +  ++    E       A+IA+  GR Y  MDR +  W+  K  +DA  LG A
Sbjct:   36 AETPNLNSLLNEFP--WCFLECSGEAVGLP-EGQMGNSEVGHLNIGAGRVVYQDLTRINLSVRNGDFFENPVLLDAISNVK--LNDSSLHLMGLVSYGGVHSYMTHLYALIKLARDKGLKKVYIHAFLDGRDVPPKAALADIRELDAFCKE----NGSARIATVQGR-YYAMDR-DKRWERSKLAYDALTLGVA 218          

HSP 2 Score: 21.9422 bits (45), Expect = 3.255e-22
Identity = 8/31 (25.81%), Postives = 16/31 (51.61%), Query Frame = 3
Query:  645 DQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            D+++   V+   +GK    +   D+ + FNF
Sbjct:  239 DEFVKPTVVTGSDGKPEAVVQDNDSIIFFNF 269          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_METBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanococcoides burtonii (strain DSM 6242) GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-22
Identity = 68/194 (35.05%), Postives = 102/194 (52.58%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG-----TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A+TP +D   ++ P    LL A G  VGLP E  MGNSEVGH  +GAGR+  Q    ++  + +G  +++     +K + E        LHL+GL S GGVHS +  L+ L++ A + G   I +H   DGRDV   S    +E +++ +       V  +IA+  GR Y  MDR +N WD  +  ++A   G+
Sbjct:   30 ANTPNLDDLLETYPNT--LLSASGEDVGLP-EGQMGNSEVGHLNIGAGRVVYQDLTRINRDIGNGDFFKNP---VLKQAIENAKAQGSALHLMGLFSYGGVHSHMKHLRALIEFAKDEGITEIFIHAFLDGRDV---SPRAALEDMKEHVEYCNNLSV-GKIATVSGR-YYAMDR-DNRWDRTEDAYNAITRGD 211          

HSP 2 Score: 34.6538 bits (78), Expect = 3.256e-22
Identity = 14/32 (43.75%), Postives = 21/32 (65.62%), Query Frame = 3
Query:  642 NDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            ND+++   VIVDENG+ +G +   D  + FNF
Sbjct:  232 NDEFIKPTVIVDENGRPIGRMNENDTVIFFNF 263          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI1_METBF1.171e-2236.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMA1.529e-2240.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCMO1.529e-2240.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELHP1.529e-2236.412,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLSY1.922e-2237.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHLAA1.922e-2237.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPE1.997e-2238.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METBF2.608e-2237.692,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METAC3.255e-2236.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METBU3.256e-2235.052,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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