EY659268

Overview
NameEY659268
Unique NameEY659268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:113..1014. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659268 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 46/154 (29.87%), Postives = 67/154 (43.51%), Query Frame = 3
Query:  126 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV--IMTYASKYH---DGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 533
            + +V  K+   G+C +D H I   +   ++P++ GHE  G+V  +G  VSKFK GDKV +   +  C  C  C     N C K+  I T  S      DGT  +               +S+  V  E  + +I   APLD    + C   T Y
Sbjct:   33 DHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKV-IPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGY 185          
BLAST of EY659268 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 49/148 (33.11%), Postives = 68/148 (45.95%), Query Frame = 3
Query:  132 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGT--ITY-----------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 533
            +V  K+   GIC SD H++        +PI+ GHE  GVV  VG  V+  K GDKV +   +  C  C+SC     N C K  +  +    +DGT   TY           G +++  VA E  VV+I   APL+    + C   T Y
Sbjct:   35 EVRIKILASGICRSDDHVLSGAL-KVNFPIILGHEAAGVVESVGEGVTSMKPGDKV-IPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGY 180          
BLAST of EY659268 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 3
Query:  132 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--------ASKYH-DGTITY-----GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 533
            +V  K+   GICH+D + +       ++P V GHE  G+V  VG  V+KFK GD V +   V  C  C  C     N C K+ +T          S++  +G + +       +S+  V  E  + ++ E APLD    L CA  T Y
Sbjct:   35 EVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAV-IPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGY 181          
BLAST of EY659268 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 3
Query:  129 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 533
            K+V  K+   GIC +D H+IK    +  +P++ GHE VGVV  VG  V+  + GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V ++   AP +    + C   T Y
Sbjct:   35 KEVRVKILATGICRTDDHIIKGSMVSK-FPVIVGHEAVGVVESVGEGVTTVRPGDKV-IPLFLPQCRECNACLNPEGNLCIRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGY 180          
BLAST of EY659268 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 45/159 (28.30%), Postives = 71/159 (44.65%), Query Frame = 3
Query:  129 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLXQP 566
            K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V +I + AP +    + C   T Y      G  +P
Sbjct:   35 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKP 191          
The following BLAST results are available for this feature:
BLAST of EY659268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
ADH4_STRCA3.347e-1129.87Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_UROHA4.371e-1133.11Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHL_GADMO5.709e-1131.08Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH7_MOUSE5.709e-1129.73Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH7_HUMAN5.709e-1128.30Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659268 ID=EY659268; Name=EY659268; organism=Citrus sinensis; type=EST; length=901bp
ATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAG
AACGCCTTTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTT
TCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAA
CTCACTGTGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGG
GGCAATGCCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGT
GACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGG
GAGTAGGATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATT
GATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTA
CCATGATGGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCG
ATGAGCACTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACT
GCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTA
TGGACTCGNACAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTC
TATGCCATGTCGCTGTCAAATTCGCAAAGCTATGGGGGTTAATGTGACTG
TGATCAGTACCTNCCCCTAGCAGATNAGTGAAGCCCGTGACGTNCTGGCG
CTGATTCCTTTTTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATG
GGGCACATGGATGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAAT
GCCCGTGATTGGNACTGTGAAATCTCAAGGAAAGNNCTGTACTNCTGGTG
CACCCGAGAAGCACTAAAGCTACCAGCTTCCCCTGCTACGGGGAGGAAAA
T
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