EY659264

Overview
NameEY659264
Unique NameEY659264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2605 contig Csv1_Contig2605:110..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 2
Query:  170 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 424
            +LVVVDF A+WCGPC+ IAP + + A++  +  F K+DVDE+  VA    V +MPT +F K GK V +VVG+    ++Q IA ++
Sbjct:   20 KLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASNV 104          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIO_PLAF7 (Thioredoxin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0545 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2
Query:  170 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLA 427
            +LV+VDF A WCGPC+ IAPF  E +K    ++F+KVDVDE+  V     + +MPTF   K G  VD ++G+    L+Q I K+ A
Sbjct:   19 ELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKYAA 104          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIO2_DROYA (Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 42/97 (43.30%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  137 NEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPN-VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 424
            N QL K++   +LVV+DF A+WCGPC+ I+P LAEL+ +  + V+ LKVDVDE + +A ++ + +MPTF+FLK G  V++  G+  + L+  I  ++
Sbjct:   12 NGQLTKASG--KLVVLDFFATWCGPCKMISPKLAELSTQYADTVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAQRLEDVIKANI 106          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIO2_DROME (Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  149 QKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 424
            Q +  + +LVV+DF A+WCGPC+ I+P L EL+ +   NV+ LKVDVDE + +A ++ + +MPTF+FLK G  V++  G+  + L+  I  ++
Sbjct:   22 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKANI 114          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIOT_DROME (Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15
Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  170 QLVVVDFTASWCGPCRFIAPFLAELAKKLPN-VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKH 421
            +LVV+DF A WCGPC+ IAP L ELA +  + V+ LKV+VDE + +  ++ V +MPTF+F+K G +++  VG   ++L + + KH
Sbjct:   21 KLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVDENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAKLMEKH 105          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: TRX1_SCHPO (Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 5.014e-15
Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 2
Query:  140 EQLQKSNETK------QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 424
            +Q+  S+E K      +LVVVDF A+WCGPC+ IAP   + +    +  F+KVDVD+L  +A +  V AMP+F   K G+ ++++VG+   +L+ +I  +L
Sbjct:    3 KQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKANL 103          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15
Identity = 34/98 (34.69%), Postives = 61/98 (62.24%), Query Frame = 2
Query:  140 EQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP--NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLA 427
            ++  K   + +++++DF A+WCGPCR I+P   + ++K    N++F KVDVD    ++ +  + AMPTF   K+G+ +D++VG+    L+  + K LA
Sbjct:    9 DEFNKLTNSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLVQKSLA 106          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: THIO_CHLTR (Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15
Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 2
Query:  173 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELQQTIAKH 421
            LV++DF A WCGPC+ + P L  LA +LP+V  LKVD+D     A  ++V ++PT +  K+GK V++ VG K K+ L + I+KH
Sbjct:   18 LVLIDFFAEWCGPCKMLTPVLEALAAELPHVTILKVDIDSSPRPAEQYSVSSIPTLILFKDGKEVERSVGLKDKDSLIKLISKH 101          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15
Identity = 36/101 (35.64%), Postives = 62/101 (61.39%), Query Frame = 2
Query:  137 NEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATASA 439
            N  L++S +  +L+++DF A+WCGPCR I+P   + + +  N  FLKV+ D  + +   + + AMPTF+FLK  + VD V G+ ++ + + I +H +   A
Sbjct:   13 NNILERS-DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQHYSPTPA 112          
BLAST of EY659264 vs. ExPASy Swiss-Prot
Match: TXND2_RAT (Thioredoxin domain-containing protein 2 OS=Rattus norvegicus GN=Txndc2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 2
Query:   68 PRKAEMAAAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAK 418
            P +AE+   EEG V      E + E L+ + E  +LV VDF+A WCGPCR + P    L+ K  +V+FL+VD ++ + +  D  V  +PTF F K  + V +  G+  E+L+++IA+
Sbjct:  434 PFEAEIETLEEGMVRVIKDKEEFEEVLKDAGE--KLVAVDFSAPWCGPCRKMRPHFHSLSLKHEDVIFLEVDTEDCEQLVQDCEVFHLPTFQFYKNEEKVGEFSGALVEKLEKSIAE 548          
The following BLAST results are available for this feature:
BLAST of EY659264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
TRX2_YEAST7.735e-1645.88Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 ... [more]
THIO_PLAF77.735e-1645.35Thioredoxin OS=Plasmodium falciparum (isolate 3D7)... [more]
THIO2_DROYA7.735e-1643.30Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 S... [more]
THIO2_DROME1.010e-1541.94Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 ... [more]
THIOT_DROME2.939e-1544.71Thioredoxin-T OS=Drosophila melanogaster GN=TrxT P... [more]
TRX1_SCHPO5.014e-1538.61Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1... [more]
THIO_COPCM6.548e-1534.69Thioredoxin OS=Coprinus comatus PE=1 SV=1[more]
THIO_CHLTR6.548e-1545.24Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 ... [more]
NGLY1_CAEEL6.548e-1535.64Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
TXND2_RAT1.459e-1437.61Thioredoxin domain-containing protein 2 OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659264 ID=EY659264; Name=EY659264; organism=Citrus sinensis; type=EST; length=655bp
ATCACCAATAGCAANAAAGCGAGGGAGAGAATAGAAGTATCGTTGGGTGG
AGTAGTGGTGGTAATAACCGCGGAAAGCAGAAATGGCAGCAGCAGAAGAG
GGACAAGTCATCGGGTGCCACACCGTTGAGGCCTGGAACGAGCAGCTCCA
GAAGAGCAATGAAACCAAACAGCTGGTTGTTGTTGATTTCACTGCTTCGT
GGTGCGGACCATGCCGTTTCATTGCTCCTTTCTTGGCAGAGCTGGCCAAG
AAACTGCCTAATGTCCTGTTTCTGAAGGTTGATGTGGATGAACTGAAGAG
TGTTGCCACTGACTGGGCAGTGGAGGCCATGCCAACTTTCATGTTCCTGA
AAGAGGGGAAGATTGTGGACAAGGTGGTTGGATCAAAGAAAGAGGAACTG
CAGCAGACTATTGCCAAGCATCTGGCAACTGCCTCTGCCTAATAAGTTAT
AACTATCCTCCTGCCTTTTGGCTTTAGAGGCTATAGACCTCAATATATGC
TATCAGTCTGTAATTTACTTATTAGAGTGGTTATGGGATTGTGTTTGTTT
GTGTGTTTGAATATTCCGTAATTTACTGTTCTATGAAGCTCATACTGTGG
TCTTTACAATAATTTAATTTCATATTTGGGGTAAAAAAAAAAAAAANNAA
NNAAA
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