EY659233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.311e-12 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 338 GVFLVAINFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKMVK 508 G F + I+ P +YP +PP + F TK+FHPNI+ G ICLD+LK WS T+ + + Sbjct: 48 GKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCR 105 HSP 2 Score: 33.113 bits (74), Expect = 3.311e-12 Identity = 17/42 (40.48%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 204 RILKELKDLQKDPPTSCSAGPAAE-DMFHWQATIMGPSDSPY 326 R++KE K LQ + P E D++ W A I GP D+PY Sbjct: 4 RLMKEYKVLQNEEFEDILLYPRDESDLYRWVAIIKGPPDTPY 45
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.406e-12 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 278 HVPLASHNYGPF**PIC*YAGVFLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMVKL*TNARYSA--DDDWLLN 556 HV + N PF GVF + + P DYP PKV F TK++HPNI+ G ICLD+LK++WSPAL I + + L A SA DD L N Sbjct: 36 HVIVTGPNDSPF------EGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQI-RTILLSIQALLSAPNPDDPLAN 123
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12 Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 278 HVPLASHNYGPF**PIC*YAGVFLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMVKL*TNARYSA--DDDWLLN 556 HV +A PF G F + + P +YP PKV F TK++HPN++ +G ICLDILK++WSPAL I + V L A SA DD L N Sbjct: 36 HVVIAGPQDSPF------EGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQI-RTVLLSIQALLSAPNPDDPLAN 123
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 5.421e-12 Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 2 Query: 338 GVFLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMVKL 511 G+F + + D+P PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + ++ + Sbjct: 57 GLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSV 114 HSP 2 Score: 30.4166 bits (67), Expect = 5.421e-12 Identity = 16/42 (38.10%), Postives = 20/42 (47.62%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGPAAEDMFHWQATIMGPSDSPY 326 K++ KELK L + PP ED A I GP +PY Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPY 54
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 7.156e-12 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 2 Query: 344 FLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWS 478 + +++ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWS 123 HSP 2 Score: 32.7278 bits (73), Expect = 7.156e-12 Identity = 15/46 (32.61%), Postives = 25/46 (54.35%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGPAAEDMFHWQATIMGPSDSPYADMQ 338 KR+ +EL L SA P ++++F W TI G + + Y D++ Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLR 78
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 7.188e-12 Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 338 GVFLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKMV 505 G F ++FP +YP PP V F ++++HPN+ S+G +C+ IL E+W+P T+ +V Sbjct: 53 GFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIV 121 HSP 2 Score: 38.1206 bits (87), Expect = 7.188e-12 Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPAAE-DMFHWQATIMGPSDSPY 326 AS + K+LKDL K P SAG E ++F W +IMGP D+ Y Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLY 50
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 7.218e-12 Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 2 Query: 338 GVFLVAINFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTI 493 G +++ I+ YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ Sbjct: 52 GQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSL 104 HSP 2 Score: 33.113 bits (74), Expect = 7.218e-12 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 276 DMFHWQATIMGPSDSPY 326 DMFHW+A I GP+++PY Sbjct: 33 DMFHWKAVIEGPTETPY 49
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 9.292e-12 Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 2 Query: 344 FLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 493 + +++ F DYPFK PKV F T FHPN++ G+ICLDIL+++WS A + Sbjct: 85 YRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDV 134 HSP 2 Score: 29.6462 bits (65), Expect = 9.292e-12 Identity = 14/42 (33.33%), Postives = 21/42 (50.00%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGPAAEDMFHWQATIMGPSDSPY 326 KR+ EL L SA P +++F W+ TI G D+ + Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVF 80
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 9.292e-12 Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 344 FLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWS 478 + +++ FP YP+ P V F T FHPN++S+G+ICLDILK++WS Sbjct: 79 YKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWS 123 HSP 2 Score: 31.187 bits (69), Expect = 9.292e-12 Identity = 16/51 (31.37%), Postives = 25/51 (49.02%), Query Frame = 3 Query: 186 RVMASKRILKELKDLQKDPPTSCSAGPAAEDMFHWQATIMGPSDSPYADMQ 338 R KR+ +EL L SA P ++++F W TI G + Y D++ Sbjct: 28 RGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLR 78
BLAST of EY659233 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 59.6918 bits (143), Expect = 9.323e-12 Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 2 Query: 338 GVFLVAINFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE 469 GVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL E Sbjct: 53 GVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHE 96 HSP 2 Score: 31.5722 bits (70), Expect = 9.323e-12 Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 3 Query: 213 KELKDLQKDPPTSCSAGPAAE-DMFHWQATIMGPSDSPY 326 ++L +L K+P SAG + D++ W+ I+GP D+ Y Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLY 50 The following BLAST results are available for this feature:
BLAST of EY659233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659233 ID=EY659233; Name=EY659233; organism=Citrus sinensis; type=EST; length=817bpback to top |