EY659226

Overview
NameEY659226
Unique NameEY659226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.040e-14
Identity = 70/227 (30.84%), Postives = 111/227 (48.90%), Query Frame = 2
Query:    2 LKVTKLGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYGSRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFA------ALPWRLGRQSVLAALKDSLFRLGLSSVELYQLHWAGIWGNEGFIDG-LGDAVEXGLVKAVGVSNYSEKRLRNAYEKLKKRGIPLASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYT 661
            LKV ++G GA + G    + N   +       K    T+LD G+ F DTA +YG         SE L+G  ++ER  R+   E+ +ATK A      ++     R+ + + ++ SL RL    ++LY +H+         + G L +  + G +KA+G SN   ++L++        G  L   Q  YSLI R  E+  +   C++ GI+ I Y P+A G LTGK+T
Sbjct:   12 LKVKRIGFGANAVGGHNLFPNLNDE-----TGKDLVRTALDGGVNFIDTAFIYGLG------RSEELIGEVVQERGVRN---ELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQD----FNADGY-LEVFQAEYSLIQRDAEKE-LLPYCEKQGISFIPYFPLASGLLTGKFT 218          
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 71/266 (26.69%), Postives = 119/266 (44.74%), Query Frame = 2
Query:    2 LKVTKLGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYG--SRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWR-----------LGRQSVLAALKDSLFRLGLSSVELYQLHW----AGIWGNEGF--------------IDGLGDAVEXGLVKAVGVSNYSEKRLRNAYEKLKKRGIP-LASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYTPQNPPTGPRGRIYT 703
            L+V+ LG+G  ++G+     N + D      A A  D ++  GI   D AE+Y    R     + +ET +G ++ +   R+   ++ +A+K +  P R           L R+++  AL DSL RL    ++LYQ+HW       +G  G+              +D L +    G ++ +GVSN +   +        K  +P + + Q  YSL+ R  E  G+       G+ L+AY  +  G LTGKY     P G R  +++
Sbjct:   11 LEVSTLGLGTMTFGE----QNSEAD------AHAQLDYAVAQGINLIDVAEMYPVPPRPETQGL-TETYVGNWLAKHGSRE---KLIIASKVSG-PSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEV-GLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFS 260          
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 71/266 (26.69%), Postives = 119/266 (44.74%), Query Frame = 2
Query:    2 LKVTKLGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYG--SRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWR-----------LGRQSVLAALKDSLFRLGLSSVELYQLHW----AGIWGNEGF--------------IDGLGDAVEXGLVKAVGVSNYSEKRLRNAYEKLKKRGIP-LASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYTPQNPPTGPRGRIYT 703
            L+V+ LG+G  ++G+     N + D      A A  D ++  GI   D AE+Y    R     + +ET +G ++ +   R+   ++ +A+K +  P R           L R+++  AL DSL RL    ++LYQ+HW       +G  G+              +D L +    G ++ +GVSN +   +        K  +P + + Q  YSL+ R  E  G+       G+ L+AY  +  G LTGKY     P G R  +++
Sbjct:   11 LEVSTLGLGTMTFGE----QNSEAD------AHAQLDYAVAQGINLIDVAEMYPVPPRPETQGL-TETYVGNWLAKHGSRE---KLIIASKVSG-PSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEV-GLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFS 260          
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11
Identity = 71/285 (24.91%), Postives = 120/285 (42.11%), Query Frame = 2
Query:    2 LKVTKLGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYGSRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWR--------LGRQSVLAALKDSLFRLGLSSVELYQLHWAGIWGN-EGFIDGLGDAVEXGLVKAVGVSNYSEKRLRNAYEKLKKRGI--PLASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYTPQNPPTGPRGRIYTAEYLRNLQPLLNRIKELXENYSKTSHQ*SSTGYXARQWCA 823
            L+V++L  GAW      + N        +K AKA      D G+ FFD AEVY +        +E ++G+ +++   R    +V V+TK   L W         L R+ ++  L+ SL RL +  V++   H        E  +  +   ++ G+    G S +S +++  A+    +  +  P+   Q  Y+L  R   E+         G+ L  + P+A G LTGKY   N P   R  +   + L N   + + ++++       S    S    A  WCA
Sbjct:   11 LRVSQLSYGAW----VTFGNQLD-----VKEAKALLQACRDAGVNFFDNAEVYANG------RAEEIMGQAMRDLGWR--RSDVVVSTK---LFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGVLTGKYAKGNIPADSRFALENYKNLANRSLVDDTLRKVNGLKPIASELGVSLAQLAIAWCA 274          
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 69/256 (26.95%), Postives = 111/256 (43.36%), Query Frame = 2
Query:    2 LKVTKLGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDN---GITFFDTAEVYGSRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWR-----------------LGRQSVLAALKDSLFRLGLSSVELYQLHWAGIWGNEGFIDGLGDAV-------EXGLVKAVGVSNYSEKRLRNAYEKLKKRGIPLASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYTPQNPPTGPR 688
            + ++++G+G W+ G    WN     DR++       DT L+    GI   DTA  Y    +FG  NSE ++G+ +K+     P  +V V TK   + W                  L  +S+   +  SL RLG+  +++Y  HW  +     F   + + V         G ++A+G +N     +R   E L+   + +   Q  YS++ R  E N +   C + GI +  Y P+ QG LTG  T    P G R
Sbjct:   11 ITLSRMGLGTWAIGGGPAWNGDL--DRQI-----CIDTILEAHRCGINLIDTAPGY----NFG--NSEVIVGQALKKL----PREQVVVETK-CGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSV---PPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIR---EYLQYGELDII--QAKYSILDRAME-NELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGAR 239          
BLAST of EY659226 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 58/207 (28.02%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   17 LGVGAWSWGDTXYWNNFQWDDRKMKAAKAAFDTSLDNGITFFDTAEVYGSRASFGAINSETLLGRFIKERKQRDPEVEVTVATKFAALPWRLGRQSVLAALKDSLFRLGLSSVELYQLHWAGIWGNEGFIDGLGDAVEXGLVKAVGVSNYSEKRLRNAYEKLKKRGIPLASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQ 637
            +G G W  G+         D  + K   AA    ++ G+T  DTAE+Y   A  GA   E ++G  +   +++     V + +K    PW  G Q  + A + SL RL    ++LY LHW+G +  E  +  +   +  G ++  GVSN     ++  ++     G   A+NQV Y L  R  E + +   C +  + ++AY P+AQ
Sbjct:   17 VGQGTWYMGE---------DASQRKTEVAALRAGIELGLTLIDTAEMY---ADGGA---EKVVGEALTGLREK-----VFLVSK--VYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQ--LPGGNQCATNQVLYHLGSRGIEYD-LLPWCQQQQMPVMAYSPLAQ 198          
The following BLAST results are available for this feature:
BLAST of EY659226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
YCCK_BACSU4.040e-1430.84Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
TAS_SHIFL1.437e-1126.69Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1[more]
TAS_ECOLI1.437e-1126.69Protein tas OS=Escherichia coli (strain K12) GN=ta... [more]
KCAB_ORYSJ1.876e-1124.91Probable voltage-gated potassium channel subunit b... [more]
YDJG_ECOLI3.201e-1126.95Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YEAE_ECOLI5.460e-1128.02Uncharacterized protein yeaE OS=Escherichia coli (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659226 ID=EY659226; Name=EY659226; organism=Citrus sinensis; type=EST; length=874bp
ATTGAAGGTGACAAAGCTTGGCGTTGGGGCTTGGTCATGGGGTGACACTA
NCTACTGGAATAACTTCCAATGGGATGACAGGAAGATGAAGGCTGCTAAA
GCTGCTTTTGATACCAGTCTGGATAATGGAATAACTTTTTTCGATACTGC
TGAAGTATATGGTTCTAGGGCCTCATTCGGTGCCATAAATTCCGAAACAC
TACTGGGAAGATTTATAAAGGAAAGGAAACAAAGGGATCCGGAAGTGGAG
GTTACTGTTGCAACCAAGTTTGCAGCTTTGCCATGGAGGCTGGGCCGTCA
GAGTGTCCTCGCTGCTCTTAAGGATTCCCTTTTCCGGCTTGGCCTTTCTT
CTGTTGAACTTTATCAGCTGCACTGGGCTGGAATTTGGGGAAATGAAGGG
TTTATTGATGGTCTTGGAGATGCTGTGGAGCANGGCCTTGTGAAGGCTGT
TGGTGTTTCAAATTACAGTGAGAAACGACTTCGCAATGCTTACGAAAAGC
TTAAAAAGAGAGGAATTCCATTAGCTTCAAACCAAGTGAACTATAGCCTC
ATATACAGAAAACCAGAAGAGAATGGTGTGAAGGCTGCCTGTGATGAACT
TGGGATCACTTTAATTGCATATTGTCCTATTGCTCAAGGTGCTCTCACTG
GAAAGTATACACCACAGAATCCACCAACTGGGCCTCGAGGCCGGATCTAC
ACTGCCGAGTATCTAAGAAATCTCCAACCACTGTTGAACAGAATCAAGGA
ACTANGAGAGAACTACAGCAAAACTTCACACCAGTAGTCCTCAACTGGCT
ATTNAGCCAGACAATGGTGTGCCNATCCCCAGAGCCAAAATGCAGAACAG
CTGCANAAATCGCGGTGCATTGGG
back to top