EY659217

Overview
NameEY659217
Unique NameEY659217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig185 contig Csv1_Contig185:207..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.001e-40
Identity = 90/235 (38.30%), Postives = 133/235 (56.60%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIP--TGVSPSQRIKMENFXRKHMTYSYCYDQIRY-KVPPFEC 737
            TG+GF S   YL G FS  IK+    +AG V AFY+S+ +     HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWFDP+ ++H+YSILW   QI+F++D +PIR FK +  +G  FP  +PM +Y ++W+  DWAT GG  + ++  AP++  +  F + GC        +  CD         P    +  +Q  ++    +K+  Y+YC D  RY  + P EC
Sbjct:   63 TGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKGD--REQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCE---ASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40
Identity = 88/235 (37.45%), Postives = 131/235 (55.74%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSK---VSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRYKVPPFEC 737
            TG+GF +   YL G FS  IKL    +AG V AFY+S+ +     HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWFDP+ D+H YS+LW    I F++D  PIR FK +  +G  +P  +PM LY+++W+  DWAT GG+ + ++  AP+V  +  F + GC         +K   T+ ++         +  +Q  ++    ++H  Y+YC D  RY     EC
Sbjct:   62 TGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFSGGKGD--REQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCE----ASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.457e-40
Identity = 96/244 (39.34%), Postives = 133/244 (54.51%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDF-VLHGCSFDPIE--QTSSKC---DITESSKVSI-----PTGVSPSQRIKMENFXRKHMTYSYCYDQIRYKVP-PFEC 737
            +GSGF S   YL+G     IKL    +AG V  FY+ +  +     DEIDFEFLGN+ G  + + TN+Y  G     RE+++ LWFDP+  FH YSILW  S I+FYIDG PIREFK    +G  +P  +PM +Y ++W+  DWAT GG  + N+   P+V  F ++   + C +  +    T+S C   D T SS  S        G+  S +  +    RK M Y+YC D+ R+    P EC
Sbjct:   58 SGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGL---TWDEIDFEFLGNVSGDPYIVHTNVYTQGKGD--REQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVEC 296          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.652e-40
Identity = 87/233 (37.34%), Postives = 132/233 (56.65%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRY-KVPPFEC 737
            +GSGF S+  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGN+ G  + + TN+Y  GS    +E++++LWFDP+ +FH Y I W   +IIF +DGIPIREFK + S+G  FP K PM LYA++W+   WAT GG  + ++  AP+   + ++ + GC +       S C    S        +  + + +M+    K+M Y+YC D+ R+ +  P EC
Sbjct:   60 SGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNLSGHPYTLHTNVYTKGSGD--KEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVW---ANGKSSCPANSS---WFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281          

HSP 2 Score: 21.557 bits (44), Expect = 9.652e-40
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1
Query:    7 RDGKSVHLSLDERQG 51
            RDGK + LSLD+  G
Sbjct:   47 RDGKLLSLSLDKSSG 61          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.297e-39
Identity = 90/235 (38.30%), Postives = 133/235 (56.60%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPT---GVSPSQRIKMENFXRKHMTYSYCYDQIRYKVPPFEC 737
            TG+GF +   YL G FS +IK+    +AG V AF +S+ +     HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWFDP+  +H+YS+LW   QI+F +D IPIR FK    +G  FP  +PM +Y ++W+  DWAT GG  + ++  AP+V E+  F + GC        +S+   T+  +    T    +   Q  +++   +K   Y+YC D+ RY   P EC
Sbjct:   62 TGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKGD--REQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCE----ASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.694e-39
Identity = 89/233 (38.20%), Postives = 132/233 (56.65%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRY-KVPPFEC 737
            +GSGF SH  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGNI G  + + TN+Y  G+    +E++++LWFDP+ DFH Y I+W   ++IF IDGIPIREFK + ++G  FP  +PM LYA++W+   WAT GG  + ++  AP+   + ++ +  C +       S C    SS  +         R+K     RK+M Y+YC D+ R+ +  P EC
Sbjct:   60 SGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTGD--KEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVW---SNGKSSCS-ANSSWFTQVLDFKGKNRVKWAQ--RKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.928e-39
Identity = 93/243 (38.27%), Postives = 132/243 (54.32%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSP---SQRI------KMENFXRKHMTYSYCYDQIRYKVP-PFEC 737
            +GSGF +   YL G     +KL    +AG V A+Y+ S GD +    DEIDFEFLGN+ G  + + TN+Y  G     RE++++LWFDP+ DFH YS+LW    I+F +D IP+REFK    MG  +P  +PM LY+++W+   WAT GG  + ++  AP+   + +F    C             ++   + S P G SP   SQR+      KM    RK+M Y+YC D  R+    P EC
Sbjct:   60 SGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW----DEIDFEFLGNLTGDPYTMHTNVYTQGKGD--REQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADAC-------------VSSGGRSSCPAG-SPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.437e-39
Identity = 86/233 (36.91%), Postives = 131/233 (56.22%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRYKVP-PFEC 737
            +GSGF S D YL G FS  +KL    +AG V +FY+S+G+     HDEID EF+GN+ G  + + TN++ NG     +E ++ LWFDP+ DFH Y I+W    IIF +D +P+R FK+   +   +P +KPM L+AT+WDGS WAT  G  ++++  AP+V  +  +  + C  +      S     E +   I   +  ++   +    R +M+Y+YC D  R+    P EC
Sbjct:   61 SGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGE--GDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGK--KEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLA--YPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.098e-38
Identity = 90/240 (37.50%), Postives = 131/240 (54.58%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRI------KMENFXRKHMTYSYCYDQIRY-KVPPFECV 740
            +GSGF S + YL G  S  +KL    +AG V   Y+ +        DEIDFEFLGN  G+ + + TN+Y  G     +E+++ LWFDP+ +FH Y+ILW   +IIF +DG PIREFK   S+G  FP  KPM +Y+++W+  DWAT GG  + ++  AP+   +  F    C +     ++ K     +SK    TG   SQ +      +M    R +M Y+YC D  R+ +  P EC+
Sbjct:   53 SGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGT---TWDEIDFEFLGNSSGEPYTLHTNVYTQGKGD--KEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVW-----SNGKSSCPNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECL 282          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38
Identity = 91/240 (37.92%), Postives = 133/240 (55.42%), Query Frame = 3
Query:   42 KTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGC------SFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRYKVP-PFEC 737
            ++G+ F S   +L G     IKL    + G VVA+YMS+    + N DEIDFEFLGN+ G+ + +QTN+Y  G  +  REER +LWFDP+ DFH YSILW   QI+F +D IPIR ++     G  +P  +PMS+ A++W+G  WAT GG  ++++   P+V  F D+ +  C      SF   E T +  +  E S       ++  Q+   +   + H+ Y YC D  R+    P EC
Sbjct:   66 ESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSD---QPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDN--REERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFS------SLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294          
The following BLAST results are available for this feature:
BLAST of EY659217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
XTH_SOYBN2.001e-4038.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.413e-4037.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH4.457e-4039.34Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH9.652e-4037.34Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN1.297e-3938.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH1.694e-3938.20Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH4.928e-3938.27Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ6.437e-3936.91Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH22_ARATH1.098e-3837.50Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH1.434e-3837.92Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659217 ID=EY659217; Name=EY659217; organism=Citrus sinensis; type=EST; length=898bp
GTTCATAGAGATGGAAAATCTGTTCATTTATCTCTAGATGAAAGACAGGG
TCTGGATTTGTGTCACATGACCTCTATCTTCATGGTTTCTTCAGTGCTTC
AATAAAGTTGCCTGCTGATTATACTGCCGGCGTTGTTGTTGCCTTCTATA
TGTCAAATGGTGACATGTTTGAGAAGAATCATGATGAAATAGACTTTGAG
TTCTTGGGTAATATTAGAGGCAAAAATTGGAGGATTCAGACTAATATTTA
TGGCAATGGAAGCACCAGCATCGGAAGAGAAGAGAGATACAATCTCTGGT
TTGATCCTTCTGATGATTTCCATCAGTACAGTATTCTCTGGACTGATTCC
CAGATCATATTTTATATAGACGGTATTCCAATTAGGGAGTTTAAGAGAAC
TGCATCTATGGGAGGAGATTTTCCTGCTAAGCCGATGTCTTTGTACGCCA
CAATCTGGGATGGCTCTGATTGGGCTACAAATGGTGGCAAATACCGAGTG
AACTACAAATATGCTCCCTATGTGACTGAATTCTCTGACTTCGTACTCCA
CGGATGTTCATTTGATCCTATTGAGCAAACTTCTTCCAAGTGTGACATAA
CCGAAAGTTCCAAAGTATCAATCCCTACTGGCGTCTCCCCATCACAGAGA
ATTAAAATGGAAAACTTTANGAGGAAGCATATGACCTATTCCTACTGCTA
TGACCAAATTCGATACAAAGTTCCTCCATTTGAGTGTGTGATCAACCCCC
TTGAGGCGGAGCGCCTTAAAGTACACGATCCAGTTACATTCNGGGGGAGG
GCGGCGCCATCACGGGAAACGACACCACCGAGCCGATCAAGCGAACCAAG
NNCAATGACGTTGAGGAGACTATATGCTACATGCAGACACTATTTGTC
back to top