EY659085

Overview
NameEY659085
Unique NameEY659085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.936e-12
Identity = 37/106 (34.91%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    1 PRVRGNITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYF 318
            P +  N+  +++ GT ++E+PSSI+ L  L  L L + + LK+LP+ + KLK L+ L + GC +L+R P+    ++ L  L    T I E+P SI  L  +  + F
Sbjct: 1345 PEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLF 1450          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: YG015_HUMAN (Leucine-rich repeat and death domain-containing protein LOC401387 OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 45/191 (23.56%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLP-ITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLPKLPCNLLS 585
            N+  + L    ++++P+SI  +  L H+ +  C   ++ P  LC L++L VL +   + LQ++  ++ NL+ +  L+         P  + +L+ +  +   + KG  L  +   +  +  L++L++++  I E+P ++G L ++ +LH   N    +P S++ L++L++L +     L +LP    N+ S
Sbjct:  534 NLKYLDLGKNQIKKIPASISNMISL-HVLILCCNKFETFPRELCTLENLQVLDLSE-NQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLS-GNNLTALPSAIYNIFS 721          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: POPC_RALSO (Protein popC OS=Ralstonia solanacearum GN=popC PE=4 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 58/204 (28.43%), Postives = 97/204 (47.55%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGN-NFERIPESIIQLSNLERLFIRYCERLQSLPKLPCNLLSXDAHHCTALESLP 624
            ++  + +D ++L +LP+    L  L+H+ L++ K L+ LP+ +  L +L  L +     L  LP   G L  L  L   G  I E+ PS+     ++ +         LP  F    L+NL  L+L++  + ELP + G L ++ TL L+GN     +P S+  LS LE L ++     +  P  P + L       + L S+P
Sbjct:  383 SLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHEL-PSMGGASSLQTLTVDDTALAGLPADFG--ALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPPMGPGSALKTLTVENSPLTSIP 582          

HSP 2 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 63/210 (30.00%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   34 LDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGN-NFERIPESIIQLSNLERLFIRYCERLQSLPKL-PCNLLSXDAHHCTALESLPGYSPVVMNLIY 657
            ++ + LE+LP+    L +L+ L L++ K L+ L SG+ +L +L  L +     L+RLP+ LG +E L +   IG  I  + PS   +  ++ +    +    LP  F    L NL  ++L++  + +LP S+G L ++ TL L+ N     +P S  QLS L+ L +    R+  LP +   + L       TAL  LP     + NL +
Sbjct:  300 IEDSPLEQLPAGFADLDQLASLSLSNTK-LEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEELTL---IGGRIHAL-PSASGMSSLQKLTVDNSSLAKLPADFG--ALGNLAHVSLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLN-GNRIHELPSMGGASSLQTLTVDDTALAGLPADFGALRNLAH 501          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: PIDD_HUMAN (Leucine-rich repeat and death domain-containing protein OS=Homo sapiens GN=LRDD PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   46 ALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLP 561
            AL  LP+ +  L+ L+HL L+   SL++LP+ + +++ L  L++   + L  LPE LG L AL  L      +  +PP++  L  ++ +   +N   +LP    + GL +L +LNL    +  LP SL  L S+  L L  N    +P  + +L  L RL +R   +L+ LP
Sbjct:  113 ALTNLPAGLSGLAHLAHLDLS-FNSLETLPACVLQMRGLGALLLSH-NCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPP--EIGGLGSLLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLR-DNQLRDLP 279          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: LAP2_MOUSE (Protein LAP2 OS=Mus musculus GN=Erbb2ip PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 54/182 (29.67%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLP 561
            N+T ++L+   LE LP++   L+KL  L L +   LK LP  + +L  L+ L + G +    +PE L  L  L      G  +T +P  I  L+++   Y   +K     +   +   +N +D  L+   + +LPE++G L +VTTL ++ N    +P+SI  L ++E L   + E +++LP
Sbjct:  139 NLTQLYLNDAFLEFLPANFGRLTKLQILELRE-NQLKMLPKTMNRLTQLERLDL-GSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLT--YLDVSKNNIEMVEEGISTCENPQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNE-IEALP 315          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: SHOC2_XENLA (Leucine-rich repeat protein SHOC-2 OS=Xenopus laevis GN=shoc2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = 1
Query:   19 ITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLPK 564
            IT ++L G  L+ LP+ +  L  L  L L++  SL SLP  L  LK L +L +   + L+ +P  +  L +L  L      IT V   +  L ++  +    NK   LP    +  L NL  L++    +  LP+ +G  + +T L L+ N    +P++I  LS+L RL +RY  RL ++P+
Sbjct:  120 ITELYLYGNKLQSLPAEVGNLVNLVKLALSE-NSLTSLPDSLDNLKKLCMLDLRH-NKLREIPPVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPA--EIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRY-NRLSAVPR 296          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: LRC40_MOUSE (Leucine-rich repeat-containing protein 40 OS=Mus musculus GN=Lrrc40 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMEL-PESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLPKLPCNL 579
            N+ T+HL    L  +P   E LS L  L L+  + L ++P+    L SL  L +   + L+ LP E+  ++ L  L      +  VPP +  ++ +  +Y  RNK   LP        + L++L+L +  I +L  E L  L ++  L L GN    +PE +  L +LERL +        +  LPC+L
Sbjct:  152 NLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNR-LATVPADFALLSSLLRLNLSS-NQLKNLPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP---EFPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSN----NDISSLPCSL 331          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: SUR8_DROAN (Leucine-rich repeat protein soc-2 homolog OS=Drosophila ananassae GN=Sur-8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 53/183 (28.96%), Postives = 98/183 (53.55%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSK-LSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLP 561
            N+ +++L+   ++++P  I   +K L+ L + +   L +LP  +    ++  L +   + LQ+LP+++ NL+ L+IL      + ++P +I  L+R+R +    N+  +LP    +  L  L+ L L    I  LP S+G L ++T L +  NN + +PE I  L +LE L+I     L+ LP
Sbjct:  416 NVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKE-NMLTALPLDIGTWVNMVELNL-ATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPHEIGL--LHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLP 594          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: LRC39_BOVIN (Leucine-rich repeat-containing protein 39 OS=Bos taurus GN=LRRC39 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 48/167 (28.74%), Postives = 85/167 (50.90%), Query Frame = 1
Query:   16 NITTMHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNL 516
            N+  + L    + E+P  I  L++L  L L+    +K++P  L    SL+ L +    ++  LP+EL NL  L  L       T +PP+++ +  +  +  G N+   LP T  ++ +QNL  L L    I  LPE++  + +++TL L  N  + IP  + +++NL
Sbjct:  107 NLIVLDLSRNTITEIPRGIGLLTRLQELILS-YNRIKTVPMELSYCASLEKLELAVNRDISDLPQELSNLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQLPDT--IERMQNLHTLWLQRNEITCLPETISSMKNLSTLVLSNNKLQDIPVCMEKMTNL 270          
BLAST of EY659085 vs. ExPASy Swiss-Prot
Match: SHOC2_NEMVE (Leucine-rich repeat protein soc-2 homolog OS=Nematostella vectensis GN=v1g189306 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 55/188 (29.26%), Postives = 96/188 (51.06%), Query Frame = 1
Query:    1 PRVRGNITTMHLDGTALEELPSSIECLSK-LSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPESIIQLSNLERLFIRYCERLQSLP 561
            P+    + T  ++   ++++P  +   +K LS L + D   L SLP       SL  L +   + + +LPE++  L  L++L      + ++P  I  L+++R +    NK  S+P    ++ L++L  L L    +  LP S+G LSSVT L +  N    +P+ I  + +LE+L++   E LQSLP
Sbjct:  337 PKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKD-NQLTSLPLDFGSWISLVELNV-ATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPT--EIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLP 520          
The following BLAST results are available for this feature:
BLAST of EY659085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
WRK19_ARATH6.936e-1234.91Probable WRKY transcription factor 19 OS=Arabidops... [more]
YG015_HUMAN9.058e-1223.56Leucine-rich repeat and death domain-containing pr... [more]
POPC_RALSO1.183e-1128.43Protein popC OS=Ralstonia solanacearum GN=popC PE=... [more]
PIDD_HUMAN1.545e-1131.98Leucine-rich repeat and death domain-containing pr... [more]
LAP2_MOUSE1.545e-1129.67Protein LAP2 OS=Mus musculus GN=Erbb2ip PE=1 SV=2[more]
SHOC2_XENLA2.018e-1131.32Leucine-rich repeat protein SHOC-2 OS=Xenopus laev... [more]
LRC40_MOUSE3.442e-1129.63Leucine-rich repeat-containing protein 40 OS=Mus m... [more]
SUR8_DROAN4.496e-1128.96Leucine-rich repeat protein soc-2 homolog OS=Droso... [more]
LRC39_BOVIN4.496e-1128.74Leucine-rich repeat-containing protein 39 OS=Bos t... [more]
SHOC2_NEMVE5.872e-1129.26Leucine-rich repeat protein soc-2 homolog OS=Nemat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659085 ID=EY659085; Name=EY659085; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCGGTAATATAACAACGATGCATTTAGATGGAACTGCACT
GGAGGAACTGCCTTCGTCCATCGAGTGTCTATCTAAGCTTTCGCACTTGG
GCCTTGCAGATTGTAAAAGTCTCAAGAGTCTCCCAAGCGGCCTGTGTAAG
TTGAAATCTCTAGATGTTCTCATTATCGATGGTTGCTCGAATCTTCAGAG
ATTGCCCGAGGAACTTGGAAATTTAGAAGCTTTGGATATTTTGCACGCTA
TAGGAACTTCTATAACAGAAGTACCGCCATCCATCGTCCGTTTGAAAAGG
GTTCGTGGAATATATTTCGGGAGAAACAAGGGTTTATCATTGCCAATCAC
ATTCTCTGTAGATGGCTTGCAAAATCTAAGGGATTTAAATCTAAATGATT
GCGGCATCATGGAGTTACCTGAAAGTCTTGGCCTGTTATCCTCAGTAACA
ACACTGCATCTAGAGGGAAACAATTTTGAGAGAATACCAGAAAGCATCAT
ACAACTTTCTAATTTGGAAAGGCTCTTCATAAGGTATTGCGAGAGGCTTC
AATCCTTACCAAAGCTTCCATGCAATCTACTTTCGNTGGATGCACATCAT
TGCACCGCACTGGAATCATTACCAGGTTATTCCCCAGTAGTGATGAATCT
TATTTACGGACTTTATACCTGAGCGATAATTTAATTNGNATCNGAATGAG
ATTAGAGGGTTTGTCAAAGGAGCTCTGCAGAAAATTCACTTTTGGCAACG
CACGTCTAGAGAAACACGGAAAAGGNATGCGTTAATACTCTCCTTTTATT
TAAAAAGAGCTTAAGAAAGATGCCGATGACCATACCCGGGGGGGGGAATA
TATGGTAATGATACTTGCCCCCTTCTTGACGCCATATTTTACGTAATTCA
ACTTTCCGATAAATTTCGGT
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