EY659073

Overview
NameEY659073
Unique NameEY659073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659073_ssr46 microsatellite EY659073_ssr46:46..69. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY659073 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.759e-39
Identity = 98/237 (41.35%), Postives = 141/237 (59.49%), Query Frame = 1 
Query:  112 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFPPNLXQPGATAPPRDKVVIFGDGNPKXYTG--R*Y*TYTIKAXDDPRTLNKNLTFSLPEYLLINDLGXLG--EKRLANPXK 810
            + IL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F++LG  IV G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV +  F  YF   L +P     P+D++ ++G G  K      +    YTIK   DPR LN+ + +  P   +I  L  +   EK++    K
Sbjct:    8 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYR-PSTNIITQLELISRWEKKIGKKFK 235
The following BLAST results are available for this feature:
BLAST of EY659073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
EGS1_OCIBA1.759e-3941.35Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659073 ID=EY659073; Name=EY659073; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGGCTTCCTATACAAGGCGCCGGTATCATTTCATTCAATAA
TAATAATAATAATAATAATAAACAAACTCTCCGGAATTGAACTGAACGAG
TTTCAGAAATGGCATCGATTCTATCCATCGGCGGGACAGGGTATATCGGT
AAATTCATCGTGGAAGCAAGCGTGAAAGCCGGCCACCCGACGTTCGTGCT
CGTGAGGGAATCCACAGTCTCAGGTCCTTCCAAATCTCAGCTCCTCGACC
ACTTCAAAAACCTCGGCGTCAAAATCGTTGTCGGAGATGTTTTGAATCAC
GAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCGACAGT
CGGTCACGCTTTATTAGCCGATCAGGTCAAGATTATTGCTGCCATTAAAG
AAGCCGGTAACGTTAAGAGATTCTTCCCATCGGAATTTGGAAATGATGTT
GATCGAGTCCATGGCGCCGTGGAGCCAACAAAATCGACGTATGACGTAAA
GGCGAAAATCCGCCGAGCCGTTGAGGCAGAAGGCATTCCGTACACTTACG
TAGAATCTTATTTTTTTGATGGCTACTTCCCTCCTAATTTGNTGCAGCCT
GGGGCCACTGCCCCCCCTAGGGATAAGGTTGTCATCTTCGGCGATGGAAA
TCCAAAGNNTTATACAGGAAGATGATATTGAACCTACACTATCAAAGCAG
NTGATGATCCGAGAACCTTGAACAAAAACCTTACATTCAGCCTCCCGGAA
TATTTACTCATCAATGATCTAGGGNCTCTGGGGGAGAAAAGATTGGCAAA
CCCCCNAAAGGGAGAATGTTCAAAGGGACACTCCTAAAGATTATCAAGAG
CTGCACCTCCCCACGAGGGAATAATCAATTATCCTCTGCTTTCGGAGGGA
GTCAACCACCTCAGT
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