EY659069

Overview
NameEY659069
Unique NameEY659069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659069_ssr458 microsatellite EY659069_ssr458:458..469. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13803 contig Csv1_Contig13803:7..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 3
Query:  129 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 407
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS +T+C+ V+
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 3
Query:  132 ITCGQVTASLAPCIPFLRTGGRFPPP-PCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 404
            +TCGQVT +LAPC+ +LR+    P P  CC+ VR LN AARTT D++ AC CLK+    + G+  N AAGLP++CGV IPYKISP+TDC+RV
Sbjct:   28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  117 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 407
            P   A++CGQV + LAPC+P+L+  GR P   CC GV+ L GAA++  DR+ AC CLK A   I+GI    AAGLP  CGV IPYKISPSTDCS+V+
Sbjct:   20 PHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  117 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 407
            P   +++CG+VT+ LAPC+P+L   GR P   CC GV+ L GAA+T  DR+ AC CLK A  +I+GI    AAGLP  CGV IPYKISPSTDCS V+
Sbjct:   20 PHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 3
Query:  126 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 407
            +AITCG+V  +LAPC+ +L+ GG  P   CC GVR+LN AA TTPDRQAACNCLK A G+I  +  N AA LP +C V IPYKIS ST+C+ +R
Sbjct:   23 SAITCGRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 3
Query:  120 VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 407
            V  AITCG V +SL+PC+ +L  GG   PPPCC+GV+ LNG A+TTPDRQ AC CL+ A    +G+ P++A+GLP +CGV IPY IS ST+C+ ++
Sbjct:   21 VDAAITCGTVASSLSPCLGYLSKGG-VVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSA---AKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 55/92 (59.78%), Postives = 67/92 (72.83%), Query Frame = 3
Query:  129 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 404
            AI+CGQV++++A C+ + R  G  P   CCSGVRSLN AARTT DR+AACNCLK A   I G+    AA +PS+CGV +PY IS STDCSRV
Sbjct:   26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  129 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 404
            AI+CGQV ++++PC+ + R GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  129 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 404
            AI+CGQV ++++PC+ + R GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116          
BLAST of EY659069 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  129 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 404
            AI+CGQV ++++PC+ + R GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
The following BLAST results are available for this feature:
BLAST of EY659069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
NLTP2_LENCU9.550e-2659.14Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP_DAUCA1.629e-2557.61Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP2_TOBAC1.629e-2556.70Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]
NLTP2_SOLLC1.629e-2556.70Non-specific lipid-transfer protein 2 OS=Solanum l... [more]
NLTP_CICAR2.127e-2559.57Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP4_ARATH2.127e-2555.21Non-specific lipid-transfer protein 4 OS=Arabidops... [more]
NLTP1_SORBI2.778e-2559.78Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP2_ORYSI3.629e-2558.70Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLT2B_ORYSJ3.629e-2558.70Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]
NLT2A_ORYSJ3.629e-2558.70Non-specific lipid-transfer protein 2A OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659069 ID=EY659069; Name=EY659069; organism=Citrus sinensis; type=EST; length=621bp
CCACGCGTCCGAGAACCTGATAACTAGCTATAACCAAGCAAAAGCCTCCC
TGAAGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTG
CATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGA
CAGCCTCCTTGGCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTT
CCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAG
AACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACG
GAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAA
TGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCTAG
GGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGAC
TGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTCTTTGTCCGAA
CGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTTTGTATATTTG
CTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTTTTGAGTGATT
AAAAAAAAAAAAAAAAAAAAA
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