EY659068

Overview
NameEY659068
Unique NameEY659068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659068_ssr273 microsatellite EY659068_ssr273:273..284. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659068_ssr878 microsatellite EY659068_ssr878:878..889. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7453 contig Csv1_Contig7453:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659068 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.069e-12
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 2
Query:  263 RNLFNQSMRNHTALVMKKILEIYKG--FEEINQLVDVAGGLGANLSLLVSKYPQIR-GINFDSPHVIKDAP-----SYQGVEHVGGDMFVEVPKGEAIFLKWILHDWSDDQCVKILKNCYDALPEFGKV----IVVD 637
            ++LFNQ+M+ +T   +  I +  KG  F + + +VD+ G  G  +  L+  YP I+ GINFD   VI  +      S+  + H+ G+ F  VP+ +   +K+ILHDW    CVKILK    ++    K+    I++D
Sbjct:  164 KDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIIID 299          
BLAST of EY659068 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.110e-12
Identity = 51/170 (30.00%), Postives = 77/170 (45.29%), Query Frame = 2
Query:  161 WYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKIL-EIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYQGVEHVG-------GDMFVEVPKGEAIF-LKWILHDWSDDQCVKILKNCYDALPEFGKVIVVDSL 643
            W H    +  G   F +     + F Y  +       F  SMR  T  +   +  E    F     +VD+ G  G+ L+ ++S +P + G+ FDSP   +DA +      VG       GD F  VP G  ++ LK ILHDWSD +   IL+    A+P   +++VV+ L
Sbjct:  143 WSHFDHSIRTGEPAFDQVFGT-DFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVL 311          
The following BLAST results are available for this feature:
BLAST of EY659068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
OMT9_DICDI1.069e-1233.58O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
DMPM_STRAD3.110e-1230.00O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659068 ID=EY659068; Name=EY659068; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTAACATATAATCTTGTCACAAATAAAGATGGAAATGTTT
GCGGAGTATATGGTTTAGCGTCCGTTTGCAGATATTTGCTTCCAAATGAA
GACGGAGTTTCTCTTGCTCCCATTTTCCTCTTAGCTCAGGAGAAAGTTTC
TGTAGATCCTTGGTACCACTTGAAAGATTGTTTATTGGAAGGGACCCTAC
CTTTTATGAAGGCACATAATGCAAAAAATCCATTTGAGTATGCTATGAAA
GATGCTAGAAGACGGAACCTCTTCAATCAATCAATGCGCAATCATACAGC
TTTAGTTATGAAGAAAATTCTTGAAATCTACAAAGGATTTGAAGAGATAA
ACCAATTGGTAGATGTTGCCGGTGGTTTAGGTGCTAATCTCAGCTTACTA
GTTTCTAAATACCCACAAATTCGGGGCATTAACTTTGACTCGCCTCATGT
CATTAAAGATGCACCTTCTTATCAAGGTGTGGAGCATGTTGGAGGAGATA
TGTTTGTTGAAGTGCCTAAAGGAGAAGCTATTTTCTTGAAGTGGATACTT
CATGACTGGAGTGATGACCAATGTGTGAAGATACTGAAGAATTGCTACGA
TGCTCTTCCAGAATTCGGGAAGGTCATTGTGGTAGACTCTTTATACCAGA
GTCCCTTGAGACTGATATTTTAAGCAGGTTTGTTTATCTGCTTGACATGC
AAATGACACCTGTATTTCCTGGGGGGAAGGAGAGGACAGTANAGGAGTTG
AAGGCTCTGGCGACAAAGCTGGATTACAGCTGGTAAACTTGTCTGCCGTG
CTTACAGCTGTTGGGTTGTGAACTCAACAATGATCCGAGCTTTGACAGCG
TACAGGTCATTCAAGGTTCTATTTAATTAAATAAATAAAGTGCGACGCCG
TCCTATTATTTTG
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