EY659064

Overview
NameEY659064
Unique NameEY659064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7452 contig Csv1_Contig7452:1..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.567e-37
Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPEG+D IP  I D  AKKP++WD++EDG W+PP IPNP YKG W+ K IKNP YKG W  P IDNP++  D  LY  K +K+VG E+WQVK+GS++DNIL+ DD   AK+  E+
Sbjct:  235 KPEGWDDIPATIADKDAKKPEDWDDEEDGTWEPPMIPNPEYKGEWKAKMIKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFDNILVTDDLEAAKKFAED 349          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_SCHMA (Calreticulin OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 6.139e-35
Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 2
Query:   11 DAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEEVLSNR 379
            D  KP+ +D  PK IPD  AKKPD+WD+  DG W+ P+  NP YKG W P+RI NP YKG+WK   IDNPE++ DP+LYVL  I YVG ++WQV +GS++DNILI D P +AK+  E +   R
Sbjct:  227 DDKKPDNWDQ-PKTIPDMDAKKPDDWDDAMDGEWERPQKDNPEYKGEWTPRRIDNPKYKGEWKPVQIDNPEYKHDPELYVLNDIGYVGFDLWQVDSGSIFDNILITDSPDFAKEEGERLWRKR 348          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  DP +Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  DP +Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  DP +Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  DP +Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.746e-33
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  D ++Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.746e-33
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  D ++Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.746e-33
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  D ++Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.746e-33
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP+YKG W  P IDNPE+  D ++Y       +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
The following BLAST results are available for this feature:
BLAST of EY659064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALR_CHLRE8.567e-3757.39Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=... [more]
CALR_SCHMA6.139e-3554.47Calreticulin OS=Schistosoma mansoni PE=2 SV=2[more]
CALR_MACFU1.512e-3352.17Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=... [more]
CALR_MACFA1.512e-3352.17Calreticulin OS=Macaca fascicularis GN=CALR PE=2 S... [more]
CALR_HUMAN1.512e-3352.17Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1[more]
CALR_CERAE1.512e-3352.17Calreticulin OS=Cercopithecus aethiops GN=CALR PE=... [more]
CALR_RAT5.746e-3351.30Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=... [more]
CALR_RABIT5.746e-3351.30Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1... [more]
CALR_MOUSE5.746e-3351.30Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1[more]
CALR_CRIGR5.746e-3351.30Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659064 ID=EY659064; Name=EY659064; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGATGCCATCAAACCAGAGGGATATGATTCAATTCCAAAAG
AAATTCCGGACCCGAAAGCGAAGAAGCCTGACAATTGGGATGAAGACGAG
GATGGCCTATGGAAACCACCAAAGATACCAAATCCCGCATATAAAGGACC
ATGGAGGCCCAAGAGGATCAAGAACCCAAACTATAAAGGGAAGTGGAAGA
TCCCTTACATTGACAATCCAGAGTTTGAAGATGATCCCGATCTTTACGTG
CTTAAGCCAATTAAGTATGTAGGCATTGAAGTTTGGCAGGTCAAGGCGGG
TTCAGTTTATGACAACATTTTGATCTGTGATGATCCTGCATATGCAAAAC
AAGTGGTCGAGGAAGTACTTTCTAACAGGGAGATTGAAAAAGAGGGTTTT
GAGGAAGCAGAGAAAGTGAGAAAAGCGCGAGAGGAAGAGGAAGCTCAACG
AGCAAGAGAGGAAGGTGAAAAGAGGAGAAGAGAGAGGGGTTATGATCGAA
GAAGATATCGGGATCGCTACAGAGATAAATACCCGAAGCATGATTACTTA
GACGATGATTATCATGATGAGCTATGAAGCAGAGGTCCCTCACTGGTGTT
CCTCACCTGCCCTCCTCAGGGGTGCATCGCCTTTTATGTGAAGGATTGAT
GCTTGCAGCTGCTATAATCAGTAGCATTCGCCCCTGAGTTGTATTTTTGG
CTCTGATTATTGNAGTATTATTTGGAGGCAACACTCCAGCATTTCTAGAT
ACCGAACTAANTGAAGTTTGTTTTTATTGATGGGGCATGCTTTACTTTGA
AGGTAATAAAACACTTTTTTTTTTTAACCAAAAAAAAAAAAAAAAAAAAA
AAAAGGGCGGCGCTCTAAAGATCCAAGTTACGTACCCGGGATGGGACGCA
TAGTCCTCTAAAGGCCCCCAAATCAATCCCTGGCCCGCTTTAAACGCCGG
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