EY659064

Overview
NameEY659064
Unique NameEY659064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7452 contig Csv1_Contig7452:1..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.086e-23
Identity = 55/132 (41.67%), Postives = 81/132 (61.36%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYK-----GPWRPKRIKNPNYKGKWKIPYIDNPEFE--------DDPDLYVL-----KPIKYVGIEVWQVKAGSVYDNILICDDPAYAK 349
            +A KPEG+ D  P+E+ DP+A KP++WD++EDG+W+ PKI NP  +     G W+    +NP YKGKW  P IDNP ++         +PD + L     +PI  +GIE+W ++ G ++DNILI  D   A+
Sbjct:  263 EAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKDEKVAE 394          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.853e-23
Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 2
Query:    8 SDAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLW-----------------KPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYA 346
            S  +KP G+ D  PK IPDP A+KPD+W+ED DG W                 KPP I NP YKG WRP  + NPNY+G W    I NP++ +D   ++L     +G+E+W + +   +DN +IC +   A
Sbjct:  306 SSVVKPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRIGCGEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEVA 436          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.420e-23
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA-------------------YKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KP+G+ D  P+ +PDP A+KP++WDED DG W+ P+I NP                    YKG W+P  I NPNY+G WK   I NP+F +D + + + P   +G+E+W + +   +DN ++C D
Sbjct:  317 EATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGD 444          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.391e-23
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA-------------------YKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KPEG+ D  P+ +PDP A+KP++WDED DG W+ P+I NP                    YKG W+P  I NP+Y+G WK   I NP+F +D + + + P   +G+E+W + +   +DN +IC D
Sbjct:  316 EATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.391e-23
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA-------------------YKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KPEG+ D  P+ +PDP A+KP++WDED DG W+ P+I NP                    YKG W+P  I NP+Y+G WK   I NP+F +D + + + P   +G+E+W + +   +DN +IC D
Sbjct:  316 EATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.195e-23
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA-------------------YKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KPEG+ D  P+ IPDP A+KP++WDED DG W+ P+I NP                    YKG W+P  I NPNY+G WK   I NP+F +D + + + P   +G+E+W + +   +DN +I  D
Sbjct:  317 EATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIISGD 444          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.201e-22
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA-------------------YKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KPEG+ D  P+ IPDP A+KP++WDED DG W+ P+I NP                    YKG W+P  I NPNY+G WK   I NP+F +D + + + P   +G+E+W + +   +DN +I  D
Sbjct:  317 EATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIISGD 444          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.568e-22
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 2
Query:    8 SDAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWK-----------------PPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYA 346
            S A+KP+G+ D+ P+ IPDP A+KP +W+ED DG W+                 PP I NP YKG WRP  I NPNY+G W    I NP++ +D   ++L   + +G+E+W + +   +DN +IC +   A
Sbjct:  302 SSAVKPDGWLDNEPEFIPDPNAEKPFDWNEDMDGEWEAPHISNPACRIGCGEWSPPMIDNPKYKGIWRPPMIDNPNYQGIWSPRKIPNPDYFEDNHPFLLTSFRALGLELWSMTSDIYFDNFIICSEKEVA 432          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 6.590e-21
Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPN-------------------PAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAK 349
            +A KPEG+ D  P E+ DP+A KP++WD++EDG W+ PK+ N                   PAYKG W    I NP YKG WK   I NP++  + +   L+PI  +GIE+W ++ G ++DNILI  D   A+
Sbjct:  265 EAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDY-FELERPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAE 396          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.504e-20
Identity = 54/127 (42.52%), Postives = 75/127 (59.06%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYK-----GPWRPKRIKNPNYKGKWKIPYIDNPEFE--------DDPDLYVL-----KPIKYVGIEVWQVKAGSVYDNILICDD 334
            +A KPEG+ D  P+EI DP+A KP++WD++EDG W+ P+I NP  +     G WR    +NP YKGKW  P IDNP ++         +PD + L     +PI  +GIE    + G ++DNILI  D
Sbjct:  267 EAEKPEGWLDDEPEEIDDPEAVKPEDWDDEEDGEWEAPQIENPKCESAPGCGEWRRPLKRNPAYKGKWHAPLIDNPAYKGIWKPREIPNPDYFELEKPNFEPIAAIGIEDLDQQDGILFDNILIASD 393          
The following BLAST results are available for this feature:
BLAST of EY659064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALX1_ARATH1.086e-2341.67Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CLGN_HUMAN1.853e-2339.69Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1[more]
CALX_CANFA2.420e-2338.28Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3[more]
CALX_PONAB5.391e-2339.06Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]
CALX_HUMAN5.391e-2339.06Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]
CALX_MOUSE9.195e-2339.84Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_RAT1.201e-2239.84Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]
CLGN_BOVIN1.568e-2238.93Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1[more]
CALX2_ARATH6.590e-2140.60Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_HELTU2.504e-2042.52Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659064 ID=EY659064; Name=EY659064; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGATGCCATCAAACCAGAGGGATATGATTCAATTCCAAAAG
AAATTCCGGACCCGAAAGCGAAGAAGCCTGACAATTGGGATGAAGACGAG
GATGGCCTATGGAAACCACCAAAGATACCAAATCCCGCATATAAAGGACC
ATGGAGGCCCAAGAGGATCAAGAACCCAAACTATAAAGGGAAGTGGAAGA
TCCCTTACATTGACAATCCAGAGTTTGAAGATGATCCCGATCTTTACGTG
CTTAAGCCAATTAAGTATGTAGGCATTGAAGTTTGGCAGGTCAAGGCGGG
TTCAGTTTATGACAACATTTTGATCTGTGATGATCCTGCATATGCAAAAC
AAGTGGTCGAGGAAGTACTTTCTAACAGGGAGATTGAAAAAGAGGGTTTT
GAGGAAGCAGAGAAAGTGAGAAAAGCGCGAGAGGAAGAGGAAGCTCAACG
AGCAAGAGAGGAAGGTGAAAAGAGGAGAAGAGAGAGGGGTTATGATCGAA
GAAGATATCGGGATCGCTACAGAGATAAATACCCGAAGCATGATTACTTA
GACGATGATTATCATGATGAGCTATGAAGCAGAGGTCCCTCACTGGTGTT
CCTCACCTGCCCTCCTCAGGGGTGCATCGCCTTTTATGTGAAGGATTGAT
GCTTGCAGCTGCTATAATCAGTAGCATTCGCCCCTGAGTTGTATTTTTGG
CTCTGATTATTGNAGTATTATTTGGAGGCAACACTCCAGCATTTCTAGAT
ACCGAACTAANTGAAGTTTGTTTTTATTGATGGGGCATGCTTTACTTTGA
AGGTAATAAAACACTTTTTTTTTTTAACCAAAAAAAAAAAAAAAAAAAAA
AAAAGGGCGGCGCTCTAAAGATCCAAGTTACGTACCCGGGATGGGACGCA
TAGTCCTCTAAAGGCCCCCAAATCAATCCCTGGCCCGCTTTAAACGCCGG
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