EY659064

Overview
NameEY659064
Unique NameEY659064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7452 contig Csv1_Contig7452:1..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.579e-20
Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 2
Query:   11 DAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNP-------------------AYKGPWRPKRIKNPNYKGKWKIPYIDNPEF--EDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVE 361
            +A KPE +     E+ DP+AK P++WD++EDG W+ PKI NP                   AYKG W    I NPNYKG WK   I NPE+   + PD    +PI  +GIE+W ++ G ++DN+LI  D   A+   E
Sbjct:  273 EAEKPEPWLDHEPEVDDPEAK-PEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKSNPAYKGKWSAPYIDNPNYKGIWKPQEIPNPEYFELEKPD---FEPIAAIGIEIWTMQDGILFDNVLIAKDDKIAESYRE 406          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.723e-19
Identity = 52/137 (37.96%), Postives = 67/137 (48.91%), Query Frame = 2
Query:   14 AIKPEGYDSIPKE-IPDPKAKKPDNWDEDEDG-------------------LWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            A KP  ++    E I DP+AKKP +WDED DG                    WK P I NP YKG W   +I NP +KGKW    IDNP + +      L PI  VGIE+W +    ++DNILI      +  V ++
Sbjct:  309 ATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFEPKPFAGLAPITAVGIEMWTMSENILFDNILITSSEEDSSDVAKQ 445          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.055e-19
Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDG-------------------LWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILI 325
            DA+KPE + +  P  IPDP+A+KP++WD++EDG                    WKPP I NP Y+GPW P  I NP + G+W    I NP++ DD       P+  VG E+W ++    + NI +
Sbjct:  282 DAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNIYV 406          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 8.055e-19
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNP-------------------AYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILI 325
            +A  PE + +  P  IPDP+A+KP++WD++EDG W PP +PNP                   AYKG W    I NP YKG WK   I NP + +D      +P+  VG E+W ++   ++DNI I
Sbjct:  293 EATMPEDWLEDEPTSIPDPEAEKPEDWDDEEDGDWIPPTVPNPKCNEVSGCGPWTPPMKKNPAYKGKWTAPLIDNPAYKGIWKPRKIPNPAYFEDKTPSNFEPMGAVGFEIWTMQNDILFDNIYI 417          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_YEAST (Calnexin homolog OS=Saccharomyces cerevisiae GN=CNE1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12
Identity = 45/128 (35.16%), Postives = 55/128 (42.97%), Query Frame = 2
Query:    2 HASDAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNP-------------------AYKGPWRPKRIKNPNYKGKWKIPYIDNP-EFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILI 325
            H      PE   SIP+ I DP A+KP  W E E G W PP I NP                    YKGP     I NPNY G+W  P I+NP  +E+   L +   I  V +E W      +  NI +
Sbjct:  286 HPDGTEPPEWNSSIPEYILDPNAQKPSWWKELEHGEWIPPMIKNPLCTAERGCGQQIPGLINNAKYKGPGELNEIINPNYMGEWHPPEIENPLYYEEQHPLRIENVISGVILEFWSGSPNMLISNIYV 413          
The following BLAST results are available for this feature:
BLAST of EY659064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALX_PEA5.579e-2039.86Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX_CAEEL4.723e-1937.96Calnexin homolog OS=Caenorhabditis elegans GN=cnx-... [more]
CALX_SCHPO8.055e-1937.60Calnexin homolog OS=Schizosaccharomyces pombe GN=c... [more]
CALX_ASPFU8.055e-1938.40Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_YEAST3.278e-1235.16Calnexin homolog OS=Saccharomyces cerevisiae GN=CN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659064 ID=EY659064; Name=EY659064; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGATGCCATCAAACCAGAGGGATATGATTCAATTCCAAAAG
AAATTCCGGACCCGAAAGCGAAGAAGCCTGACAATTGGGATGAAGACGAG
GATGGCCTATGGAAACCACCAAAGATACCAAATCCCGCATATAAAGGACC
ATGGAGGCCCAAGAGGATCAAGAACCCAAACTATAAAGGGAAGTGGAAGA
TCCCTTACATTGACAATCCAGAGTTTGAAGATGATCCCGATCTTTACGTG
CTTAAGCCAATTAAGTATGTAGGCATTGAAGTTTGGCAGGTCAAGGCGGG
TTCAGTTTATGACAACATTTTGATCTGTGATGATCCTGCATATGCAAAAC
AAGTGGTCGAGGAAGTACTTTCTAACAGGGAGATTGAAAAAGAGGGTTTT
GAGGAAGCAGAGAAAGTGAGAAAAGCGCGAGAGGAAGAGGAAGCTCAACG
AGCAAGAGAGGAAGGTGAAAAGAGGAGAAGAGAGAGGGGTTATGATCGAA
GAAGATATCGGGATCGCTACAGAGATAAATACCCGAAGCATGATTACTTA
GACGATGATTATCATGATGAGCTATGAAGCAGAGGTCCCTCACTGGTGTT
CCTCACCTGCCCTCCTCAGGGGTGCATCGCCTTTTATGTGAAGGATTGAT
GCTTGCAGCTGCTATAATCAGTAGCATTCGCCCCTGAGTTGTATTTTTGG
CTCTGATTATTGNAGTATTATTTGGAGGCAACACTCCAGCATTTCTAGAT
ACCGAACTAANTGAAGTTTGTTTTTATTGATGGGGCATGCTTTACTTTGA
AGGTAATAAAACACTTTTTTTTTTTAACCAAAAAAAAAAAAAAAAAAAAA
AAAAGGGCGGCGCTCTAAAGATCCAAGTTACGTACCCGGGATGGGACGCA
TAGTCCTCTAAAGGCCCCCAAATCAATCCCTGGCCCGCTTTAAACGCCGG
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