EY703296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 7.963e-104 Identity = 188/256 (73.44%), Postives = 203/256 (79.30%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 1.040e-103 Identity = 188/256 (73.44%), Postives = 203/256 (79.30%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 1.358e-103 Identity = 188/256 (73.44%), Postives = 202/256 (78.91%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYRIAGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 3.026e-103 Identity = 187/254 (73.62%), Postives = 199/254 (78.35%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYRIAGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 374.785 bits (961), Expect = 3.952e-103 Identity = 185/254 (72.83%), Postives = 200/254 (78.74%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC V+LMGAVEGYR+AGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 8.804e-103 Identity = 186/256 (72.66%), Postives = 203/256 (79.30%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 1.961e-102 Identity = 186/256 (72.66%), Postives = 202/256 (78.91%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AG PL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPL-ENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.562e-102 Identity = 184/252 (73.02%), Postives = 199/252 (78.97%), Query Frame = 2 Query: 113 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYRIAGGPL EVTDP+YPGGSFDP+G P +F + +KNGR MF F G DHLADPVNNNA T+F P K Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATNFVPGK 255
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 7.453e-102 Identity = 186/256 (72.66%), Postives = 201/256 (78.52%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGA+EGYR+AGGPL EVTDPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-DNLVDHLADPVNNNAWAYATNFVPGK 267
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 2.832e-101 Identity = 185/256 (72.27%), Postives = 200/256 (78.12%), Query Frame = 2 Query: 107 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AGGPL EV DPLYPGGSFDP+G P +F + IKNGR MF F G DHLADPVNNNA T+F P K Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWSYATNFVPGK 267 The following BLAST results are available for this feature:
BLAST of EY703296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY703296 ID=EY703296; Name=EY703296; organism=Citrus sinensis; type=EST; length=937bpback to top |