DR405978

Overview
NameDR405978
Unique NameDR405978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10693 contig Csv1_Contig10693:103..828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN1_SOLLC (Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.945e-50
Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1
Query:  163 FNVLHVEAGDGFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            F  L  EA  GFI    SHF LNG+ +  NGFN+YWLM+V +DP++R KV+    +A+  GL+V RTWAFSDGG R LQ SPG Y+E++F+GLDFVIAEA+KYGI+LILS  N ++ FGGK QYV WAR+ G  +++DD+F+ +P++K
Sbjct:   16 FLALVCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPTERYKVTEVLKDASVAGLSVCRTWAFSDGGDRALQISPGIYDERVFQGLDFVIAEAKKYGIRLILSFVNQWNDFGGKAQYVWWARNAGAQISNDDEFYTHPMLK 163          

HSP 2 Score: 46.2098 bits (108), Expect = 1.945e-50
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPR 706
            N+ T + YKDDPTIMAWELMNEPR
Sbjct:  178 NSITKVAYKDDPTIMAWELMNEPR 201          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN6_ARATH (Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.608e-50
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1
Query:  211 GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            G  F LNG  +Y NGFN YW+M + +D S R KV+  F +A++ G+TV RTWAF+DG +R LQ+SP  Y+E++FK LDFV++EARKY I+LILSL NN+D++GGK QYV W  + G  LTSDDDFF NP ++
Sbjct:   52 GMQFTLNGQPFYVNGFNTYWMMTLAADNSTRGKVTEVFQQASAVGMTVGRTWAFNDGQWRALQKSPSVYDEEVFKALDFVLSEARKYKIRLILSLVNNWDAYGGKAQYVKWGNASGLNLTSDDDFFTNPTLR 183          

HSP 2 Score: 50.8322 bits (120), Expect = 5.608e-50
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            NTFT I YK+DPTI AWELMNEPRC
Sbjct:  198 NTFTNITYKNDPTIFAWELMNEPRC 222          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN3_SOLLC (Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lycopersicum GN=MAN3 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.112e-49
Identity = 80/145 (55.17%), Postives = 111/145 (76.55%), Query Frame = 1
Query:  172 LHVEAGDGFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            L  EA  GFI    SHF LNG+ +  NGFN+YWLM+V +DP++R KV+    +A++ GL+V RTWAFSDGG R LQ SPG Y+E++F+GLDFVIAEA+KYG++LILS  N ++ FGGK +YV WAR+ G  +++DD+F+ +P++K
Sbjct:   20 LSCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPAERYKVTEVLKDASTAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVIAEAKKYGVRLILSFVNQWNDFGGKAEYVWWARNAGVQISNDDEFYTHPILK 164          

HSP 2 Score: 43.1282 bits (100), Expect = 2.112e-49
Identity = 18/24 (75.00%), Postives = 20/24 (83.33%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPR 706
            N+ T + YKDD TIMAWELMNEPR
Sbjct:  178 NSITKVAYKDDATIMAWELMNEPR 201          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MANP_ARATH (Putative mannan endo-1,4-beta-mannosidase P OS=Arabidopsis thaliana GN=MANP PE=5 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 4.233e-47
Identity = 81/163 (49.69%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  118 LAFTIFLAFFIHRQSFNVLHVEAGDGFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            L F + LA  I  QS+  +     DGF+   G  F+LNG  +YANGFNAYWL Y  +DP+ R K++  F   A                YR LQ +PGSY+EQ F+GLDF IAEA++ GIKLI+ L NN+D +GGKKQYV+WARS+G+ ++S+DDF+RNPV+K
Sbjct:    4 LCFIVLLAIVI-AQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPATRFKITNGFRNGAI---------------YRALQTAPGSYDEQTFQGLDFGIAEAKRVGIKLIIPLVNNWDDYGGKKQYVDWARSKGEMVSSNDDFYRNPVIK 150          

HSP 2 Score: 46.595 bits (109), Expect = 4.233e-47
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            NTFT + YKD+P  MAW+LMNEPRC
Sbjct:  165 NTFTKVAYKDEPASMAWQLMNEPRC 189          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN5_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza sativa subsp. japonica GN=MAN5 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 5.497e-47
Identity = 75/140 (53.57%), Postives = 100/140 (71.43%), Query Frame = 1
Query:  193 GFIRT*GSHFLLNGNL-YYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKG 609
            G +RT G+ F++ G   +Y NGFN YWLM +  DPS R KV+  F +AA+ GLTV RTWAF+DGG+R LQ+SPG Y+E++FK LDFV++EARK+ I+LIL L NN+D +GGK QYV WA++        D FF +  V+G
Sbjct:   76 GMVRTRGAQFVVGGGRPFYVNGFNTYWLMVLAVDPSTRGKVTEVFRQAAAVGLTVCRTWAFNDGGWRALQKSPGVYDEEVFKALDFVVSEARKHKIRLILPLINNWDDYGGKAQYVRWAQAAAAG-AGADAFFSDETVRG 214          

HSP 2 Score: 52.373 bits (124), Expect = 5.497e-47
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            N +TG+ Y+DDPTIMAWELMNEPRC
Sbjct:  228 NAYTGVAYRDDPTIMAWELMNEPRC 252          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN2_ORYSJ (Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica GN=MAN2 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 1.099e-44
Identity = 71/138 (51.45%), Postives = 99/138 (71.74%), Query Frame = 1
Query:  196 FIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLT-SDDDFFRNPVVK 606
            F+   G    L+G  +Y NG+N+YWLM +  +P+ R +VS+ F  A S GLTV RTWAF+DG Y  LQ SPG ++E++FK LD V+AEA ++G++LILSLANN D++GGK+QYV WA  +G  LT S+D FF +P ++
Sbjct:   54 FVERRGKRLFLDGRPFYINGWNSYWLMDLAVEPNTRPRVSSMFRTAVSMGLTVCRTWAFNDGSYNALQLSPGHFDERVFKALDRVVAEASEHGVRLILSLANNLDAYGGKRQYVRWAWEEGVGLTASNDSFFFDPAIR 191          

HSP 2 Score: 49.6766 bits (117), Expect = 1.099e-44
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            N  TG+ Y+DDPTI+AWELMNEPRC
Sbjct:  206 NHLTGLEYRDDPTILAWELMNEPRC 230          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN1_ARATH (Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis thaliana GN=MAN1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.838e-43
Identity = 76/163 (46.63%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  124 FTIFLAFFIHRQSFNVLHVEAGDGFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQ--RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            F  FL F I     N + V    GF+   G+ F+LNG   Y NGFNAYW+M   +D +   R+ V+TA  +A++ G+ VAR W F++G Y PLQ SPGSY+E +FKGLDFV+ EA ++ IKLI+SL NN++ +GG+K+YV WA      L   D+F+ N  VK
Sbjct:    8 FLFFLPFLIGN---NRICVAVKTGFVGRNGTQFVLNGEQVYLNGFNAYWMMTTAADTASKGRATVTTALRQASAVGMNVARIWGFNEGDYIPLQISPGSYSEDVFKGLDFVVYEAGRFNIKLIISLVNNFEDYGGRKKYVEWAG-----LDEPDEFYTNSAVK 162          

HSP 2 Score: 47.3654 bits (111), Expect = 5.838e-43
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            NT TG  YKDDPTI +WEL+NEPRC
Sbjct:  177 NTITGRMYKDDPTIFSWELINEPRC 201          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN8_ORYSJ (Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa subsp. japonica GN=MAN8 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.861e-42
Identity = 66/132 (50.00%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  211 GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            G+    +G  +  +GFN YWLM   +D + R +V+ A  EAA  GL V RTWAFSDGGYR LQ  P  Y+E +F+ LDFV++EA+++ ++LILSL NN++ +GGK QYV W +  G  LTS+DDFF +P +K
Sbjct:    6 GTQLWASGRPFIIHGFNTYWLMSFAADQATRPRVTAAIAEAAEAGLNVCRTWAFSDGGYRALQTVPFHYDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPTIK 137          

HSP 2 Score: 46.595 bits (109), Expect = 2.861e-42
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            NT T   YKDDPTI+AWEL+NEPRC
Sbjct:  152 NTVTNETYKDDPTILAWELINEPRC 176          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN2_ARATH (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.841e-41
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 1
Query:  172 LHVEAGDGFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFL-TSDDDFFRNPVVK 606
            L  E    F++  G+ F+++G   Y NG+N+YW M    +   R +VS      A  GLTV RTWAF+DGGY  LQ SPG ++E++FK LD VIAEA+ +G++L+LSL NN  ++GGK QYVNWA  +G  L +S+D FF +P ++
Sbjct:   34 LKTEGELAFVKRNGTQFVVDGKALYVNGWNSYWFMDHAVNDHSRHRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALDHVIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIR 179          

HSP 2 Score: 47.3654 bits (111), Expect = 6.841e-41
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            N+ TGI Y++DPTI AWEL+NEPRC
Sbjct:  194 NSLTGIEYRNDPTIFAWELINEPRC 218          
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN7_ORYSJ (Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 3.352e-40
Identity = 65/132 (49.24%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  211 GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK 606
            G+    +G  +  +GFN YWLM   +D + R +V+ A  EA   GL V  TWAFSDGGYR LQ +P  Y+E +F+ LDFV++EAR++ ++LILSL NN++ +GGK QYV W +  G  LTS+DDFF +P +K
Sbjct:   16 GTQLWASGRPFIIHGFNTYWLMSFAADQATRLRVTAAIAEA---GLNVCCTWAFSDGGYRALQTAPFHYDEDVFRALDFVVSEARRHNMRLILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPTIK 144          

HSP 2 Score: 46.595 bits (109), Expect = 3.352e-40
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query:  635 NTFTGIHYKDDPTIMAWELMNEPRC 709
            NT T   YKDDPTI+AWEL+NEPRC
Sbjct:  159 NTVTNETYKDDPTILAWELINEPRC 183          
The following BLAST results are available for this feature:
BLAST of DR405978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN1_SOLLC1.945e-5056.08Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lyco... [more]
MAN6_ARATH5.608e-5056.82Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis ... [more]
MAN3_SOLLC2.112e-4955.17Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lyco... [more]
MANP_ARATH4.233e-4749.69Putative mannan endo-1,4-beta-mannosidase P OS=Ara... [more]
MAN5_ORYSJ5.497e-4753.57Putative mannan endo-1,4-beta-mannosidase 5 OS=Ory... [more]
MAN2_ORYSJ1.099e-4451.45Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa... [more]
MAN1_ARATH5.838e-4346.63Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis ... [more]
MAN8_ORYSJ2.861e-4250.00Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa... [more]
MAN2_ARATH6.841e-4146.58Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis ... [more]
MAN7_ORYSJ3.352e-4049.24Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248F20 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248F20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405978 ID=DR405978; Name=DR405978; organism=Citrus sinensis; type=EST; length=711bp
GGGGGCAGTTCTAAGAGGAAAAACTTCACGAGTTCACTAATAAAAATATA
GCCTCATCTCCACTGCTCCTTATCCACTCAGACACAGAGAGAGTGAAAGA
GGATGAAGCTCTTGCATTTAGCTTTCACAATCTTCTTAGCCTTTTTCATC
CACCGGCAATCTTTCAACGTCCTACATGTTGAAGCAGGAGATGGATTTAT
AAGAACATGAGGATCGCATTTTCTGTTGAATGGTAATCTTTACTATGCAA
ATGGATTTAATGCATATTGGTTGATGTATGTAGATTCTGACCCATCTCAG
AGATCCAAAGTATCAACTGCTTTTCATGAAGCTGCAAGCCATGGCCTCAC
TGTTGCCAGAACTTGGGCTTTCAGTGATGGTGGTTACAGACCCTTACAGC
GTTCCCCTGGCTCCTACAATGAGCAAATGTTTAAGGGATTGGATTTTGTG
ATAGCTGAGGCTAGAAAGTATGGGATCAAGCTCATATTGAGCTTGGCCAA
CAACTATGATAGTTTTGGAGGGAAGAAGCAGTATGTGAACTGGGCTAGAA
GTCAAGGCCAATTCCTCACATCTGATGATGATTTCTTCAGAAACCCTGTT
GTTAAGGGTTACTACAAGAACCTTATCAAGATATAATACCTTTACTGGAA
TTCACTACAAAGATGACCCGACAATTATGGCATGGGAGCTTATGAATGAG
CCGAGATGCAC
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