DR405978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN5_ARATH (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.717e-39 Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 193 GFIRT*GSHFLLNGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFL-TSDDDFFRNPVVK 606 GF++ G+ F+++ Y NG+N+YW M D R+ V A GLTV RTWAF+DGGY LQ SPG ++E++F+ LD VIAEARK+ ++L+LSL NN ++GGK QYV WA +G L +S+D FF +P ++ Sbjct: 40 GFVKRNGTQFVVDDKPLYVNGWNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFQALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIR 178 HSP 2 Score: 46.9802 bits (110), Expect = 4.717e-39 Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 635 NTFTGIHYKDDPTIMAWELMNEPRC 709 N+ TGI Y++DPTI AWEL+NEPRC Sbjct: 193 NSVTGIEYRNDPTIFAWELINEPRC 217
BLAST of DR405978 vs. ExPASy Swiss-Prot
Match: MAN6_ORYSJ (Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica GN=MAN6 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 3.014e-31 Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 211 GSHFLL--NGNLYYANGFNAYWLMYVDSDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLT-SDDDFFRNPVVK 606 G+HF+ G+ Y NG+N+YWL+ S + + GL+V RTWAFSDGG LQ SPG ++E +F+ LD+VI EAR+ I+LIL L NN D+ GGK QYV WA++ G +T S D F+ +P +K Sbjct: 58 GTHFVDADTGSPLYVNGWNSYWLLPARSP----ALAAEMLRRGRRMGLSVCRTWAFSDGGPGALQISPGRFSEAVFQVLDYVIYEARRNHIRLILCLVNNLDNLGGKAQYVQWAQAAGANMTNSTDSFYSHPTIK 188 HSP 2 Score: 43.1282 bits (100), Expect = 3.014e-31 Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 635 NTFTGIHYKDDPTIMAWELMNEPRC 709 N+++ I Y D+P I AWELMNEPRC Sbjct: 203 NSYSRIRYSDEPAIFAWELMNEPRC 227 The following BLAST results are available for this feature:
BLAST of DR405978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405978 ID=DR405978; Name=DR405978; organism=Citrus sinensis; type=EST; length=711bpback to top |