DR405977

Overview
NameDR405977
Unique NameDR405977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6306 contig Csv1_Contig6306:1..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GALE_HUMAN (UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.231e-53
Identity = 111/195 (56.92%), Postives = 138/195 (70.77%), Query Frame = 3
Query:  159 MAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASE------IAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 722
            MA+ +LVTGGAGYIGSHTVL+LL  GY  VV+DN  NA         ++ +V+EL G    ++ F ++D+ D+ AL+ LF K  F AVIHFAGL+AVGESVQKPL Y+  NL GTI LLE+M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W  +LLRYFNP GAH
Sbjct:    1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR---SVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH 192          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.501e-50
Identity = 103/189 (54.50%), Postives = 132/189 (69.84%), Query Frame = 3
Query:  171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 725
            ILVTGGAGYIGSHTV++L+  GYK ++VDNL N+   AVA+V+ +      ++ F KLDLRDK  L  +F   K   VIHFA L+AVGES++ PL Y+DNN+ GTITLL VM  H  K +VFSSSATVYG    +  ++P  E  P +  NPYG+TK  IE I +D+H SD+ W+  +LRYFNP+GAHP
Sbjct:    8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRK---SIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILRYFNPIGAHP 193          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GAL10_YEAST (Bifunctional protein GAL10 OS=Saccharomyces cerevisiae GN=GAL10 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49
Identity = 100/196 (51.02%), Postives = 137/196 (69.90%), Query Frame = 3
Query:  153 DSMAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE-WKIILLRYFNPVGAHP 725
            +S +K +LVTGGAGYIGSHTV++L+  GY  VV DNL N++  +VA+++ L  +   ++ F+++DL D+  LE +F + K  +VIHFAGL+AVGES Q PL Y+ NN++GT+ LLE+M  +     VFSSSATVYG    +P ++P  EE PL   NPYG TK  IE I  D++ SD + WK  +LRYFNP+GAHP
Sbjct:    8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH---HIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHP 200          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GAL10_KLULA (Bifunctional protein GAL10 OS=Kluyveromyces lactis GN=GAL10 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.831e-49
Identity = 102/191 (53.40%), Postives = 131/191 (68.59%), Query Frame = 3
Query:  165 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 725
            K  LVTGGAGYIGSHTV++L   GYK +VVDNL N+S  +VA+++ L G +   + F K+DL +   L  LF   K  +V+HFAGL+AVGES Q PL Y+ NN++GTI LLE M +H  K LVFSSSATVYG    +  ++P  E  P    NPYG+TKL IE++ RD+H SD  +   +LRYFNP+GAHP
Sbjct:    5 KYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNSSYESVARMELLTGQE---IKFAKIDLCELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDATRFENMIPIPETCPTGPTNPYGKTKLTIEDMMRDLHFSDKSFSFAILRYFNPIGAHP 192          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.236e-49
Identity = 96/186 (51.61%), Postives = 130/186 (69.89%), Query Frame = 3
Query:  171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 725
            +LVTGG+GYIGSHT +QL+  GYK V++DNL N+    +A++  L G   +    +  D+RD+  L+++FA     AVIHFAGL+AVGESV +PL Y++NN+ GT+ LLE M A   KNL+FSSSATVYG    +P  E FP     +PYGR+KL +E+I +DV  +D +W + +LRYFNPVGAHP
Sbjct:    3 VLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVLARIHSLTGYTPE---LYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVKNLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQLADPQWNMTILRYFNPVGAHP 185          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GALE_RAT (UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.130e-48
Identity = 106/196 (54.08%), Postives = 136/196 (69.39%), Query Frame = 3
Query:  159 MAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASE------IAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE--AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 722
            M + +LVTGGAGYIGSHTVL+LL  GY  VV+DN  N+         ++ +V+EL G    ++ F ++D+ D+AAL+ LF K  F AVIHFAGL+AVGESVQKPL Y+  NL GTI LLE+M A G K+LVFSSSATVYG P  VP +   P       PYG++K FIEE+ +D+ R+D+ W  +LLRYF P+GAH
Sbjct:    1 MEEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGR---SVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGVKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVLLRYFIPIGAH 191          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GALE_NEIMA (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A GN=galE PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.087e-48
Identity = 94/187 (50.27%), Postives = 134/187 (71.66%), Query Frame = 3
Query:  165 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 722
            KNILVTGG G+IGSHTV+ LL  G++ V++DNL N+S   + ++K + G +   + F++ D+RD+  L  +FA+ +  +VIHFAGL+AVGESV +P+ Y+DNN+ G++ L E MA  G  ++VFSSSATVYG P  VP TE+ PL +  +PYG +K  +E I  D+ ++D  W +ILLRYFNP+GAH
Sbjct:    2 KNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRLKTITGQE---IPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERILTDIQKADPRWSMILLRYFNPIGAH 185          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GAL10_PACTA (Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.460e-47
Identity = 98/189 (51.85%), Postives = 127/189 (67.20%), Query Frame = 3
Query:  171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 725
            ILVTGGAGYIGSHTV++L+  GY  VVVDNL N+S   + +++ L   Q   + F K+DL D  AL+ +F      AV+HFA L+AVGES + PL Y+ NN+ G I+LL+VM  +  KN+VFSSSATVYG    +  ++P  E  P    NPYG TK+ IE I RDV+ +D  WK  +LRYFNP+GAHP
Sbjct:    4 ILVTGGAGYIGSHTVVELVNNGYNVVVVDNLVNSSYDVIVRIEVLTRKQ---IPFFKIDLNDHDALDQVFKLYPIQAVLHFAALKAVGESTKFPLNYYSNNVGGAISLLKVMEENNVKNIVFSSSATVYGDATRFENMIPIPEHCPTGPTNPYGETKITIENIIRDVYANDKSWKCAILRYFNPIGAHP 189          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: YGRE_SCHPO (Uncharacterized protein C365.14c OS=Schizosaccharomyces pombe GN=SPBC365.14c PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.902e-47
Identity = 100/189 (52.91%), Postives = 126/189 (66.67%), Query Frame = 3
Query:  171 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPK----VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 725
            +LVTGGAGYIGSHT + LL  GY  V+VDNL N+   AV ++++L G +   + FH++DL D+ AL+ +FA     AVIHFAGL+AVGESVQ PL Y+ NN+ GTI L+E M  +  ++ VFSSSATVYG P      +P  E  P E  +PYGRTKLFIE I  D  + +      LLRYFNP GAHP
Sbjct:    9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKK---VIFHQVDLLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLRYFNPGGAHP 194          
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46
Identity = 92/187 (49.20%), Postives = 131/187 (70.05%), Query Frame = 3
Query:  165 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 722
            K ILVTGG G+IGSHTV+ LL  G++ V++DNL N+S   + ++K + G +   + F++ D+RD+  L  +FA+ +  +VIHFAGL+AVGESV +P+ Y+DNN+ G++ L E MA  G   +VFSSSATVYG P  VP TE+  P +  +PYG +K  +E I  D+ ++D  W +ILLRYFNP+GAH
Sbjct:    2 KKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRLKTITGQE---IPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERILSDIQKADPRWSVILLRYFNPIGAH 185          
The following BLAST results are available for this feature:
BLAST of DR405977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GALE_HUMAN3.231e-5356.92UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE... [more]
GAL10_SCHPO1.501e-5054.50Bifunctional protein gal10 OS=Schizosaccharomyces ... [more]
GAL10_YEAST1.659e-4951.02Bifunctional protein GAL10 OS=Saccharomyces cerevi... [more]
GAL10_KLULA2.831e-4953.40Bifunctional protein GAL10 OS=Kluyveromyces lactis... [more]
GALE_YERPE8.236e-4951.61UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE... [more]
GALE_RAT3.130e-4854.08UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Ga... [more]
GALE_NEIMA4.087e-4850.27UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]
GAL10_PACTA3.460e-4751.85Bifunctional protein GAL10 OS=Pachysolen tannophil... [more]
YGRE_SCHPO5.902e-4752.91Uncharacterized protein C365.14c OS=Schizosaccharo... [more]
GALE_NEIMC1.315e-4649.20UDP-glucose 4-epimerase OS=Neisseria meningitidis ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248F19 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248F19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405977 ID=DR405977; Name=DR405977; organism=Citrus sinensis; type=EST; length=727bp
GGGGGTCAGTTTCATTTTTTTCTTTTCCTTTAAATTTCTCTGAGCGAGGC
CAAGCCCAAGTCTCATCACTTCCTTCGTAATTCCCCCGTTTCTTCAAATT
TTCGTGTACTTTGTGCCCTTTTTTTTGGTTCTTCTGATTGGTCTCTCCGT
TAGACTCCATGGCTAAGAACATTTTGGTGACCGGTGGCGCCGGTTACATT
GGAAGCCACACCGTGCTTCAGTTGCTGTTAGGCGGTTACAAAACTGTCGT
CGTCGACAATCTCGATAATGCCTCGGAAATCGCCGTCGCAAAAGTCAAAG
AACTCGCTGGCAATCAAGGCGACAACATGACCTTTCATAAGTTGGATCTC
CGGGACAAAGCAGCGCTGGAAGCATTGTTTGCCAAAACAAAGTTCGGTGC
TGTCATCCATTTTGCTGGACTGGAAGCAGTTGGTGAAAGTGTGCAGAAAC
CATTGCTGTATTTTGACAACAATCTTATTGGAACCATAACTCTCTTGGAA
GTTATGGCAGCACATGGCTGCAAAAATCTGGTCTTTTCATCATCAGCTAC
TGTTTATGGCTGGCCAAAGGTGGTTCCGTGTACAGAAGAGTTCCCGTTAG
AGGCAATGAACCCTTATGGACGTACCAAGCTTTTCATTGAAGAGATTTGC
CGTGATGTCCACCGCTCAGACTCTGAATGGAAGATCATATTGCTGAGATA
TTTCAATCCTGTTGGTGCACATCCAAG
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