CX069768

Overview
NameCX069768
Unique NameCX069768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1606_LACJO (Uncharacterized RNA methyltransferase LJ_1606 OS=Lactobacillus johnsonii GN=LJ_1606 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.160e-24
Identity = 67/178 (37.64%), Postives = 96/178 (53.93%), Query Frame = -2
Query:  219 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 752
            Q N  Q   LY        L  D  + ++D + G GT+G+  +  V+ V G E +P+A+ DA  N +LN++ NA ++QG++ K+  +  N     + +I DP R G+  KLIK LL++K    VYVSCNPAT A+DL  L            Y ++ +QPVDM P TP  E V  L L
Sbjct:  289 QLNPEQTTTLYSEALKYLDLTPD--QTLIDAYAGVGTLGILASDQVRQVIGIESIPEAVIDAQENCRLNHVRNAEYIQGNVEKLLPELKNQGVPINALIVDPPRTGLSKKLIKTLLEVKPETFVYVSCNPATLAKDLVLL---------SDAYDVRVIQPVDMMPQTPRWEGVTKLVL 455          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y3654_ANASP (Uncharacterized RNA methyltransferase alr3654 OS=Anabaena sp. (strain PCC 7120) GN=alr3654 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24
Identity = 69/179 (38.55%), Postives = 95/179 (53.07%), Query Frame = -2
Query:  216 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 752
            Q  T  AE L ++IE    L+G   + ++D +CG GT+ L L++ V+   G E+ P+A+  A  NA+ N I+N  F  G + K+    G     PD+V+ DP R G    +I+ LL  K  RIVYVSC  AT ARDL  LC         G Y ++ +Q  D FP T H+E    L LS
Sbjct:  288 QVFTETAEALLQVIESQLNLQGH--ETLIDAYCGIGTLTLPLSKQVRQAIGLELQPEAVQQAIVNAQHNGINNVEFQVGAVEKLLPKMGII---PDVVLLDPPRKGCDRIVIESLLASKPARIVYVSCKVATLARDLKLLC-------TDGTYTIQRIQSADFFPQTSHVEVAAFLVLS 454          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y053_NANEQ (Uncharacterized RNA methyltransferase NEQ053 OS=Nanoarchaeum equitans GN=NEQ053 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = -2
Query:  216 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 752
            QTN++QA  L K++++   L    + +VLDL+ G G   L +A  VK V G E+V +A+  A  NA +NNI +A F+   + K          K + +I DP R G+  K I+++ K+    IVYVSCNP T  RD++          +KG YK+  +QP+DMFP+TPHIE V L++ S
Sbjct:  284 QTNSYQAVNLVKIVKEF--LEPSENDVVLDLYSGVGLFSLQIANEVKKVIGIEIVEEAVEMAKLNASINNI-DAEFIASPVEKA------PIIKANKIIVDPPRAGLTNKAIEYIEKINPDTIVYVSCNPYTQKRDIN---------KLKG-YKIIDMQPLDMFPNTPHIENVILMKKS 443          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y2706_ENTFA (Uncharacterized RNA methyltransferase EF_2706 OS=Enterococcus faecalis GN=EF_2706 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22
Identity = 67/176 (38.07%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  225 QTNTHQAEVLYKLIEDCAGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLL 752
            Q N  Q EVLY   E    L    ++ V+D +CG GTIGL+LA+    V G + +P AI DA  NAK   ++N  +  G    +   +     KPD ++ DP R G+  KL+  LLK    ++VY+SCN +T ARDL  L            Y++  LQ VDMFP T   E V  L
Sbjct:  289 QLNPEQTEVLYN--EGIKALDLQPNETVVDAYCGVGTIGLSLAKQAHQVRGMDTIPAAIDDARFNAKRLGVTNTHYAVGTAEDLLPKWFKEGFKPDAIVVDPPRTGLDRKLLTALLKQPPKKMVYISCNVSTLARDLVQLAK---------VYQVDYLQSVDMFPQTARCEVVVKL 453          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1606_STRP1 (Uncharacterized RNA methyltransferase SPy_1606/M5005_Spy1319 OS=Streptococcus pyogenes serotype M1 GN=SPy_1606 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 68/178 (38.20%), Postives = 92/178 (51.69%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKI-VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q EVLY  +     +   GSK  ++D +CG G+IG   A  VK V G +++P+AI DA +NAK     NA +  G    I   +     + D VI DP R G+  KL+K +L  +  ++VYVSCN +T ARDL  L            Y +  +Q VDMFPHT   E V  L+
Sbjct:  283 QLNPQQTEVLYGEVVKALDV---GSKDHIIDAYCGVGSIGFAFAGKVKSVRGMDIIPEAIEDAQKNAKAMGFDNAYYEAGKAEDIISKWYKQGYRADAVIVDPPRTGLDDKLLKTILHYQPKQMVYVSCNTSTLARDLVQLTK---------VYDVHYIQSVDMFPHTARTEAVVKLQ 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: RUMA_AERHH (23S rRNA (uracil-5-)-methyltransferase rumA OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rumA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = -2
Query:  222 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDF-GNAFPKP--DIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 671
            VLDLFCG G   L LAR  + V G E     ++ A  NA+ N I+NA F + DL   GGD  G ++ +   D+V+ DP RPG   ++++ ++KL   R+VYVSCNP T ARD   L        +KG Y+L  L  +DMFPHT H+E + L E
Sbjct:  298 VLDLFCGIGNFTLPLARQAREVVGVEGELAMVARAEENARRNGINNARFYKADL---GGDIAGMSWAREGFDLVLLDPARPGA-FEVMEHVVKLSPRRVVYVSCNPVTLARDSQVL--------VKGGYRLVRLGMLDMFPHTGHLESMALFE 438          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1299_STRP3 (Uncharacterized RNA methyltransferase SpyM3_1299/SPs0562 OS=Streptococcus pyogenes serotype M3 GN=SpyM3_1299 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 67/178 (37.64%), Postives = 92/178 (51.69%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKI-VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q EVLY  +     +   GSK  ++D +CG G+IG   A  VK V G +++P+AI DA +NAK     NA +  G    I   +     + D +I DP R G+  KL+K +L  +  ++VYVSCN +T ARDL  L            Y +  +Q VDMFPHT   E V  L+
Sbjct:  283 QLNPQQTEVLYGEVVKALDV---GSKDHIIDAYCGVGSIGFAFAGKVKSVRGMDIIPEAIEDAQKNAKAMGFDNAYYEAGKAEDIIPKWYKQGYRADAIIVDPPRTGLDDKLLKTILHYQPKQMVYVSCNTSTLARDLVQLTK---------VYDVHYIQSVDMFPHTARTEAVVKLQ 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: RUMA_SHEON (23S rRNA (uracil-5-)-methyltransferase rumA OS=Shewanella oneidensis GN=rumA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 66/154 (42.86%), Postives = 87/154 (56.49%), Query Frame = -2
Query:  216 VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNA--FPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLELS 671
            +LDLFCG G   L LAR    V G E VP+ +S A  NA  N +SN TF  GDL+    D  +     K D ++ DP R G +  L ++L K+K  ++VYVSCNPA+ ARD   L        ++  YKL+ L  +DMFP T HIE + L EL+
Sbjct:  307 ILDLFCGMGNFSLPLARMGADVIGVEGVPEMVSQARENAVANGLSNLTFYHGDLS---ADLSSEPWMGKIDKLLLDPARAGAYESL-QWLKKMKPRQVVYVSCNPASLARDSAVL--------LERGYKLQKLGLIDMFPQTHHIEAMALFELA 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: Y1337_STRP6 (Uncharacterized RNA methyltransferase M6_Spy1337 OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1337 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 67/178 (37.64%), Postives = 92/178 (51.69%), Query Frame = -2
Query:  222 QTNTHQAEVLYKLIEDCAGLRGDGSKI-VLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 752
            Q N  Q EVLY  +     +   GSK  ++D +CG G+IG   A  VK V G +++P+AI DA +NAK     NA +  G    I   +     + D +I DP R G+  KL+K +L  +  ++VYVSCN +T ARDL  L            Y +  +Q VDMFPHT   E V  L+
Sbjct:  283 QLNPQQTEVLYGEVVKALDV---GSKDHIIDAYCGVGSIGFAFAGKVKSVRGMDIIPEAIEDAQKNAKSMGFDNAYYEAGKAEDIIPKWYKQGYRADAIIVDPPRTGLDDKLLKTILHYQPKQMVYVSCNTSTLARDLVQLTK---------IYDVHYIQSVDMFPHTARTEAVVKLQ 448          
BLAST of CX069768 vs. ExPASy Swiss-Prot
Match: RUMA_PSEPK (23S rRNA (uracil-5-)-methyltransferase rumA OS=Pseudomonas putida (strain KT2440) GN=rumA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22
Identity = 70/172 (40.70%), Postives = 91/172 (52.91%), Query Frame = -2
Query:  222 AEVLYKLIEDC-AGLRGDGSKIVLDLFCGTGTIGLTLARWVKHVYGYEVVPQAISDACRNAKLNNISNATFVQGDLNKIGGDFGNAFPKPDIVISDPNRPGMHMKLIKFLLKLKAPRIVYVSCNPATCARDLDYLCHGVGDQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 734
            A+V   +IE   A L     + VLDLFCG G   L LAR  + V   E V   +  A  NA+ NN+ NA F Q DL++     G A      V+ DP R G   ++++ + +LKA R+VYVSCNPAT ARD   L  G G       Y+LK    +DMFP T H+E + L E
Sbjct:  288 AQVNTAMIEQALAWLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQADLSQPLAGTGWAAEGFSAVLLDPPRDGA-FEVVQGIARLKARRLVYVSCNPATLARDAQVLV-GQG-------YRLKRAGILDMFPQTAHVEAMALFE 450          
The following BLAST results are available for this feature:
BLAST of CX069768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
Y1606_LACJO1.160e-2437.64Uncharacterized RNA methyltransferase LJ_1606 OS=L... [more]
Y3654_ANASP1.515e-2438.55Uncharacterized RNA methyltransferase alr3654 OS=A... [more]
Y053_NANEQ7.518e-2439.11Uncharacterized RNA methyltransferase NEQ053 OS=Na... [more]
Y2706_ENTFA1.086e-2238.07Uncharacterized RNA methyltransferase EF_2706 OS=E... [more]
Y1606_STRP11.418e-2238.20Uncharacterized RNA methyltransferase SPy_1606/M50... [more]
RUMA_AERHH1.852e-2243.1423S rRNA (uracil-5-)-methyltransferase rumA OS=Aer... [more]
Y1299_STRP33.159e-2237.64Uncharacterized RNA methyltransferase SpyM3_1299/S... [more]
RUMA_SHEON3.159e-2242.8623S rRNA (uracil-5-)-methyltransferase rumA OS=She... [more]
Y1337_STRP64.125e-2237.64Uncharacterized RNA methyltransferase M6_Spy1337 O... [more]
RUMA_PSEPK5.388e-2240.7023S rRNA (uracil-5-)-methyltransferase rumA OS=Pse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12F09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12F09-L18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069768 ID=CX069768; Name=CX069768; organism=Citrus sinensis; type=EST; length=753bp
GCTAATTAGACCGAATCAATCGAATTTCCAATTTTCAAATACTGTGTTTT
CTGCATGAATGAAGCTACAATTCAAAGAAATATAATCATGTAGCTGGAAA
TCACCCATCCAGATGTACAAATTAAAGATTACTGTCAGTTGGACCAGGAA
TAGCTTGGGCCCCTGCCAACCTAGTAGGAGTGCAGCAGCTAGCTTGGAAT
TGCAGCTTAAGGTCAAGAAAGTTCAAGTAGGCATACACATTCGATATGAG
GAGTGTGAGGGAACATATCTACTGGTTGTAAACTTTTTAGTTTATAACAT
CCCTTTATGTTTTGATCTCCCACACCATGACAAAGGTAATCAAGGTCACG
TGCACACGTGGCCGGATTACACGATACATAAACAATGCGTGGTGCCTTCA
GCTTTAGTAGGAACTTGATCAATTTCATGTGCATACCAGGGCGGTTTGGA
TCTGAAATGACAATGTCTGGCTTTGGAAAAGCATTGCCAAAATCTCCACC
AATTTTGTTGAGATCCCCTTGAACAAAAGTAGCATTAGAAATATTGTTCA
ACTTTGCATTTCTACAAGCATCTGATATAGCTTGAGGAACTACTTCATAT
CCATAAACATGTTTAACCCATCTTGCAAGTGTTAAACCAATGGTACCGGT
TCCACAAAATAGGTCAAGCACAATCTTGGAGCCATCACCTCTGAGACCAG
CACAATCTTCAATGAGTTTATAAAGAACCTCTGCCTGGTGAGTATTTGTC
TGG
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