DR403425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNPW (Protein recA OS=Synechococcus sp. (strain WH7803) GN=recA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.448e-38 Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 308 KVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +V S GD R +R +AL+ + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +L Sbjct: 4 EVKSSQSSGGDVRPGERDQALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASL 120 HSP 2 Score: 46.2098 bits (108), Expect = 3.448e-38 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+D+ Sbjct: 121 GVDIENLLVSQPDTGEMALEIVDQLVRSAAVDI 153
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CYAA5 (Protein recA OS=Cyanothece sp. (strain ATCC 51142) GN=recA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.498e-38 Identity = 69/102 (67.65%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 D+++AL +N I +FGK S+ RLG A VET +G LTLDLALGGGLP GR+VEI+GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS AL Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRVVEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAAL 110 HSP 2 Score: 41.5874 bits (96), Expect = 4.498e-38 Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ NL+V D GE ALEI D++ RS A+D+ Sbjct: 111 GVDINNLLVAQPDTGESALEIVDQLVRSAAVDV 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNS9 (Protein recA OS=Synechococcus sp. (strain CC9902) GN=recA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.854e-38 Identity = 70/119 (58.82%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 302 DGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 D K SD+ S +R +AL+ + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VEI+GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 4 DMKTTAPGSDARSSG--ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASL 120 HSP 2 Score: 47.7506 bits (112), Expect = 5.854e-38 Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 3 Query: 642 HIQKHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 H GVDVENL+V D GEMALEI D++ RS A+D+ Sbjct: 115 HYAASLGVDVENLLVSQPDTGEMALEIVDQLVRSAAVDI 153
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_THEEB (Protein recA OS=Thermosynechococcus elongatus (strain BP-1) GN=recA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.858e-38 Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++++AL+ A++ I SFGK S+ RLG A VET SG LTLDLALGGGLPKGRI+EI+GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y+ AL Sbjct: 12 EKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGGGLPKGRIIEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAAL 113 HSP 2 Score: 39.6614 bits (91), Expect = 5.858e-38 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 3 Query: 663 VDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 VD++NL+V D GE ALEI D++ RS A+D+ Sbjct: 115 VDIQNLLVAQPDTGEAALEIVDQLVRSTAVDI 146
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_ANAVT (Protein recA OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=recA PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.295e-37 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 356 RQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +Q+AL +N I SFGK ++ RLG A VET +G LTLDLALGGGLPKGR++EI+GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ AL Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASAL 110 HSP 2 Score: 42.743 bits (99), Expect = 1.295e-37 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL+V D GE ALEI D++ RS A+D+ Sbjct: 111 GVDIQNLLVSQPDTGESALEIVDQLVRSAAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_ANASP (Protein recA OS=Anabaena sp. (strain PCC 7120) GN=recA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.295e-37 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 356 RQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +Q+AL +N I SFGK ++ RLG A VET +G LTLDLALGGGLPKGR++EI+GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ AL Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASAL 110 HSP 2 Score: 42.743 bits (99), Expect = 1.295e-37 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL+V D GE ALEI D++ RS A+D+ Sbjct: 111 GVDIQNLLVSQPDTGESALEIVDQLVRSAAVDI 143
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_PROMA (Protein recA OS=Prochlorococcus marinus GN=recA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.686e-37 Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 323 SSDSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 S ++R +R +AL + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 14 SCPPNEARSGERDKALSLVLGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASL 125 HSP 2 Score: 46.9802 bits (110), Expect = 1.686e-37 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL+V D GEMALEI D++ RS A+DL Sbjct: 126 GVDIENLLVSQPDTGEMALEIVDQLIRSSAVDL 158
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNSC (Protein recA OS=Synechococcus sp. (strain CC9605) GN=recA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.686e-37 Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +R +AL+ + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VEI+GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 17 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASL 118 HSP 2 Score: 47.3654 bits (111), Expect = 1.686e-37 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVDVENL+V D GEMALEI D++ RS A+DL Sbjct: 119 GVDVENLLVSQPDTGEMALEIVDQLVRSAAVDL 151
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_PROM5 (Protein recA OS=Prochlorococcus marinus (strain MIT 9515) GN=recA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.197e-37 Identity = 65/110 (59.09%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 329 DSGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DS +S ++ +AL+ + I +FG+ S+ RLG A VET +G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 10 DSKESSSKEKDKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASL 119 HSP 2 Score: 46.595 bits (109), Expect = 2.197e-37 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVDVENL+V D GEMALEI D++ RS A+DL Sbjct: 120 GVDVENLLVSQPDTGEMALEIVDQLIRSTAVDL 152
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNPX (Protein recA OS=Synechococcus sp. (strain WH8102) GN=recA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.861e-37 Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +R +AL+ + I +FGK S+ RLG A VET +G LTLDLALGGG PKGR+VEI+GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASL 120 HSP 2 Score: 46.595 bits (109), Expect = 2.861e-37 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVDVENL+V D GEMALEI D++ RS A+D+ Sbjct: 121 GVDVENLLVSQPDTGEMALEIVDQLVRSAAVDI 153 The following BLAST results are available for this feature:
BLAST of DR403425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403425 ID=DR403425; Name=DR403425; organism=Citrus sinensis; type=EST; length=786bpback to top |