DR403425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_PROM0 (Protein recA OS=Prochlorococcus marinus (strain MIT 9301) GN=recA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.822e-36 Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL + I +FG+ S+ RLG A VET +G LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +L Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASL 114 HSP 2 Score: 47.3654 bits (111), Expect = 1.822e-36 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVDVENL+V D GEMALEI D++ RS A+DL Sbjct: 115 GVDVENLLVSQPDTGEMALEIVDQLIRSSAVDL 147
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNP6 (Protein recA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=recA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.823e-36 Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++++AL+ ++ I +FGK ++ RLG A VET +G LTLDLALGGGLPKGRI+E++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ++ Sbjct: 11 EKEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALGGGLPKGRIIEVYGPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSV 112 HSP 2 Score: 44.669 bits (104), Expect = 1.823e-36 Identity = 18/33 (54.55%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL++ D GEMALEI D++ RS A+D+ Sbjct: 113 GVDIDNLLISQPDTGEMALEIVDQLVRSAAVDI 145
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_SYNE7 (Protein recA OS=Synechococcus elongatus (strain PCC 7942) GN=recA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.823e-36 Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++++AL+ ++ I +FGK ++ RLG A VET +G LTLDLALGGGLPKGRI+E++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ++ Sbjct: 11 EKEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALGGGLPKGRIIEVYGPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSV 112 HSP 2 Score: 44.669 bits (104), Expect = 1.823e-36 Identity = 18/33 (54.55%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL++ D GEMALEI D++ RS A+D+ Sbjct: 113 GVDIDNLLISQPDTGEMALEIVDQLVRSAAVDI 145
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_GLOVI (Protein recA OS=Gloeobacter violaceus GN=recA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.373e-36 Identity = 64/109 (58.72%), Postives = 81/109 (74.31%), Query Frame = 2 Query: 332 SGDSRFLDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +G + +Q+AL + I +FG+ ++ RLG VET PSG +TLDLALGGGLP+GR++EI+GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+K L Sbjct: 15 AGTADEAQKQKALKMVLTQIKRNFGEGAIMRLGENTRIRVETVPSGAITLDLALGGGLPRGRVIEIYGPESSGKTTLALHAIAEIQKTGGVAAFVDAEHALDPAYAKVL 123 HSP 2 Score: 41.5874 bits (96), Expect = 2.373e-36 Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GV+V++LI+ D GEMA+EI D++ RS AID+ Sbjct: 121 KVLGVNVDDLIISQPDTGEMAMEIVDQLVRSAAIDV 156
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CYAP4 (Protein recA OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=recA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.375e-36 Identity = 66/102 (64.71%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL+ M I SFGK S+ RLG A VET P+G L LDLALGGGLP+GR+VEI+GPESSGKTTLALHAIA VQ+ GG A VDAEHA DP+Y+ L Sbjct: 10 EKQKALNLVMTQIERSFGKGSIMRLGDATRMKVETVPTGALPLDLALGGGLPRGRVVEIYGPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVL 111 HSP 2 Score: 41.2022 bits (95), Expect = 2.375e-36 Identity = 17/33 (51.52%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL++ D GE ALEI D++ RS A+D+ Sbjct: 112 GVDIQNLLISQPDTGETALEIVDQLVRSTAVDV 144
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_STRAW (Protein recA OS=Streptomyces avermitilis GN=recA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.159e-35 Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++ALDAA+ I FGK +V RLG +E P+G LD+ALG GGLP+GR+VE++GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K L Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKL 107 HSP 2 Score: 48.1358 bits (113), Expect = 1.159e-35 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GVD++NLI+ DNGE ALEI D + RSGA+DL Sbjct: 105 KKLGVDIDNLILSQPDNGEQALEIVDMLVRSGALDL 140
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BARBK (Protein recA OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=recA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.512e-35 Identity = 66/105 (62.86%), Postives = 82/105 (78.10%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +D+++ALDAA++ I SFGK S+ RLG G + +ET +G L+LD+ALG GGLPKGRI+EI+GPESSGKTTLALHAIAE QK GG VDAEHA DP Y++ L Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRIIEIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKL 105 HSP 2 Score: 42.3578 bits (98), Expect = 1.512e-35 Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL V D GE ALEI + + RSGA+D+ Sbjct: 106 GVDLENLFVSQPDTGEQALEITETLVRSGAVDV 138
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_OCHA4 (Protein recA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=recA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-35 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +D+ +ALDAA++ I +FGK S+ RLG + +ET P+G L+LD+ALG GGLPKGRIVEI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ L Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKL 118 HSP 2 Score: 44.669 bits (104), Expect = 1.968e-35 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD+ENL++ D GE ALEI D + RSGAID+ Sbjct: 119 GVDLENLLISQPDTGEQALEITDTLVRSGAIDV 151
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_ZYMMO (Protein recA OS=Zymomonas mobilis GN=recA PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 2.566e-35 Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +D+Q+AL+AA+ I+ +FGK SV RLGS ++T SG L LD+ALG GGLP+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K L Sbjct: 1 MDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKL 104 HSP 2 Score: 39.2762 bits (90), Expect = 2.566e-35 Identity = 18/36 (50.00%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GV+ ++LIV D GE ALEI D + RS A+D+ Sbjct: 102 KKLGVNTDDLIVSQPDTGEQALEITDTLIRSNAVDI 137
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_STRLI (Protein recA OS=Streptomyces lividans GN=recA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.338e-35 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++ALDAA+ I FGK +V R+G +E P+G LD+ALG GG+P+GR+VE++GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K L Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTNEPIEVIPTGSTALDVALGVGGIPRGRVVEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKL 107 HSP 2 Score: 48.1358 bits (113), Expect = 3.338e-35 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GVD++NLI+ DNGE ALEI D + RSGA+DL Sbjct: 105 KKLGVDIDNLILSQPDNGEQALEIVDMLVRSGALDL 140 The following BLAST results are available for this feature:
BLAST of DR403425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403425 ID=DR403425; Name=DR403425; organism=Citrus sinensis; type=EST; length=786bpback to top |