DR403425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_RUBXD (Protein recA OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=recA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.697e-34 Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 LD+ +ALD A++ I FGK S+ R+G V + +G L LDLALG GG+P+GRIVEIFGPESSGKTTLALH IAE Q+ GG A +DAEHA DP+Y++A+ Sbjct: 3 LDKSKALDTAVSQIERQFGKGSIMRMGDRASQKVASISTGSLALDLALGVGGVPRGRIVEIFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAI 106 HSP 2 Score: 42.743 bits (99), Expect = 4.697e-34 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAID 755 GVD+ENL D+GE ALEIAD + RSGA+D Sbjct: 107 GVDLENLYFSQPDSGEQALEIADTLVRSGALD 138
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_AZOLI (Protein recA OS=Azospirillum lipoferum GN=recA PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.110e-34 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 +D+Q+ALDAA++ I +FGK S+ +LG+ + E +G L LD+ALG GGLPKGRIVEI+GPESSGKTTLALHAIA+ QK GG VDAEHA DPSY++ L Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKL 118 HSP 2 Score: 40.817 bits (94), Expect = 6.110e-34 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV+++ L++ D GE ALEIAD + RSGAID+ Sbjct: 119 GVNIDELLISQPDAGEQALEIADTLVRSGAIDV 151
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CLOAB (Protein recA OS=Clostridium acetobutylicum GN=recA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.115e-34 Identity = 56/103 (54.37%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +A+DAAM+ I FGK ++ +LG ++ +GCL+LD+ALG GG+P+GR+VEI+GPESSGKTT+ALH +AE QK GG A +DAEHA DP Y++AL Sbjct: 4 EKLKAIDAAMSQIEKQFGKGAIMKLGEQDILNIDAISTGCLSLDIALGIGGVPRGRVVEIYGPESSGKTTVALHILAEAQKKGGAAAFIDAEHALDPQYARAL 106 HSP 2 Score: 45.0542 bits (105), Expect = 6.115e-34 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL+V D GE ALEIA+ + RSGAID+ Sbjct: 107 GVDIDNLVVSQPDTGEQALEIAEALVRSGAIDV 139
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_LEIXX (Protein recA OS=Leifsonia xyli subsp. xyli GN=recA PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 7.962e-34 Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++AL A+ I+ FGK SV RLGS A VE P+G + LD+ALG GGLP+GRIVEI+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y++ L Sbjct: 6 DREKALVTALAQIDRQFGKGSVMRLGSDERAPVEVVPTGSIALDVALGIGGLPRGRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPDYARKL 108 HSP 2 Score: 43.1282 bits (100), Expect = 7.962e-34 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++ L+V D GE ALEIAD + RSG+IDL Sbjct: 109 GVDIDALLVSQPDTGEQALEIADMLVRSGSIDL 141
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_EXISA (Protein recA OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=recA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.965e-34 Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++AL+ A+ I FGK S+ RLG V PSG + LD+ALG GG P+GR++E++GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP Y+K L Sbjct: 3 DRKQALEMALRQIEKQFGKGSIMRLGENTDQQVSVIPSGSIALDVALGAGGYPRGRVIEVYGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAKNL 105 HSP 2 Score: 41.2022 bits (95), Expect = 7.965e-34 Identity = 17/36 (47.22%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K+ GV+++ L++ D GE ALEIA+ + RSGA+D+ Sbjct: 103 KNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDI 138
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_KINRD (Protein recA OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=recA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.965e-34 Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++ALDAA+ I+ +FGK SV RLG +E P+G ++LD+ALG GGLP+GR+VEI+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+ L Sbjct: 6 DREKALDAALAAIDKNFGKGSVMRLGDEVRPPIEVIPTGSISLDVALGIGGLPRGRVVEIYGPESSGKTTVALHAVASAQKAGGIAAFIDAEHALDPDYAAKL 108 HSP 2 Score: 41.5874 bits (96), Expect = 7.965e-34 Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD + L+V D GE ALEIAD + RSGA+D+ Sbjct: 109 GVDTDALLVSQPDTGEQALEIADMLIRSGALDI 141
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_CLONN (Protein recA OS=Clostridium novyi (strain NT) GN=recA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.965e-34 Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA+ I FGK SV +LG VE +G L+LD+ALG GG+P+GRI+EIFGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+KAL Sbjct: 4 EKMKALQAAITQIEKQFGKGSVMKLGEEHVLNVEAISTGSLSLDIALGIGGIPRGRIIEIFGPESSGKTTVALHIIAEAQKSGGTAAFIDAEHALDPVYAKAL 106 HSP 2 Score: 44.669 bits (104), Expect = 7.965e-34 Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GVD++NLIV D GE ALEI + + RSGAID+ Sbjct: 104 KALGVDIDNLIVSQPDTGEQALEICEALVRSGAIDV 139
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_FRAAA (Protein recA OS=Frankia alni (strain ACN14a) GN=recA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.966e-34 Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 2 Query: 350 LDRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 LDR +ALD A+ I+ +FGK SV RLG ++ P+G + LD+ALG GGLPKGR++EI+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ L Sbjct: 5 LDRDKALDNALAQIDKAFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPKGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKL 108 HSP 2 Score: 45.8246 bits (107), Expect = 7.966e-34 Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL+V D GE ALEIAD + RSGA+D+ Sbjct: 109 GVDIDNLLVSQPDTGEQALEIADMLVRSGALDI 141
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_STAHJ (Protein recA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=recA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.037e-33 Identity = 64/103 (62.14%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DRQ+ALD + ++ SFGK +V +LG G V + SG +TLD ALG GG PKGRI+EI+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++AL Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEAL 106 HSP 2 Score: 40.4318 bits (93), Expect = 1.037e-33 Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GVD++NL + D+GE LEIA+ RSGA+D+ Sbjct: 107 GVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDI 139
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_OCEIH (Protein recA OS=Oceanobacillus iheyensis GN=recA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.038e-33 Identity = 62/103 (60.19%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 DR++ALD A+ I FGK S+ ++G + T PSG L LD+ALG GG P+GR+VEI+GPESSGKTT+ALHAIAE QK GG A +DAEHA DP Y+KAL Sbjct: 3 DRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKAL 105 HSP 2 Score: 40.0466 bits (92), Expect = 1.038e-33 Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 3 Query: 651 KHXGVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 K GV+++ L++ D GE ALEIA+ + RSGA+D+ Sbjct: 103 KALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDI 138 The following BLAST results are available for this feature:
BLAST of DR403425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403425 ID=DR403425; Name=DR403425; organism=Citrus sinensis; type=EST; length=786bpback to top |