DN617300

Overview
NameDN617300
Unique NameDN617300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10172 contig Csv1_Contig10172:29..542. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617300 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 51/133 (38.35%), Postives = 86/133 (64.66%), Query Frame = 2
Query:  116 EPQCLKEIRELTDKHPWSVMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHK 514
            + + ++  +E  ++H   +M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ E+ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++
Sbjct:   35 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYE 163          
BLAST of DN617300 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.587e-22
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  101 SVYPREPQCLKEIRELTDKHPWS-VMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHK 514
            SV  RE   L+E+ ++T + P    M   P+EAQFL +L++L+ A+  +EIG FTGYS L  A A+P  G+I+  DI+ +    G P  Q+AGV   ID R G A   L +L ++    G FD VFVDADK  Y++Y++
Sbjct:   17 SVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYE 154          
BLAST of DN617300 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 50/133 (37.59%), Postives = 86/133 (64.66%), Query Frame = 2
Query:  116 EPQCLKEIRELTDKHPWSVMMTSPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHK 514
            + + ++  +E  ++H   +M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYE 162          
The following BLAST results are available for this feature:
BLAST of DN617300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT2_DICDI4.278e-2238.35Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
MDMC_STRMY5.587e-2242.45O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT1_DICDI9.530e-2237.59Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617300 ID=DN617300; Name=DN617300; organism=Citrus sinensis; type=EST; length=514bp
AGAAGGTCAGGAGGAAAATAAGGATCGTTACTTCAAAACTCTACATGGGA
ACAAGACCCTTTTACAGAGTGAAAAACTTTATGAGTATATACTTGAAACC
AGTGTATATCCAAGAGAACCACAATGCTTGAAGGAGATCCGCGAGTTGAC
GGACAAGCATCCATGGAGCGTCATGATGACTTCACCTGATGAAGCACAAT
TTTTGAGCATGCTACTCAAGCTTATCAATGCCAAGAATACCATGGAAATT
GGCGTTTTCACTGGTTACTCTCTCTTAGCCACTGCCCTTGCCATTCCCGA
CGATGGCAAGATACTGGCCCTGGACATCACCAAGGAACACTACGAGAAGG
GTCTCCCTATAATTCAAAAAGCTGGTGTTGCTCACAAGATTGACTTCAGA
GAAGGCCCTGCTCTTCCTCTTCTTGATCAATTGATCCAAGACGAAAAATA
TCATGGGACATTCGACTTCGTCTTTGTTGATGCTGACAAGAATAACTACA
TTAATTACCACAAG
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