DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = -3 Query: 458 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 694 W P K +C PP + A + N+T+I + ++R+ ++F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y Sbjct: 347 WCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPRGL--------SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K +C PP+ + + A + N+TSI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 350 WCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 438
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA1_ANEPH (Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA_WHEAT (Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 452 WIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 694 W P K + PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 346 WCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 W P K + PP + A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ TA Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETA 440 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |