DN617297

Overview
NameDN617297
Unique NameDN617297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:953..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = -3
Query:  350 AVGLV*PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 625
            AV  + P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E       +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  239 AVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSK--DLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.150e-16
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = -3
Query:  365 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 607
            P++VAFEV D F  Y SG+Y  T   +   P ++ NHAV+ VGYG +   G+ YW+IKNSWG NWG+ GYF++  G + C I + A
Sbjct:  368 PMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIA 453          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.150e-16
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  353 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 607
            PVSVA +   D F+ Y SG+++   CG     ++HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  258 PVSVALDAAGDAFKHYSSGIFTGP-CGTA---IDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  350 AVGLV*PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 625
            AV  V P+SVA +      +FY SG+Y    C +   D++H V+ VGYG E    +   YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct:  238 AVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSK--DLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  353 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 607
            PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  258 PVSVALDAAGDAFKQYSSGIFTGP-CGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = -3
Query:  347 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT-CASYPVVA 607
            P+ +A +  D   +Y+ GV SS  C N  +  NHAV+ VGYGVE+GVPYW+ KN+WG++WG++GYF++    N CG+    AS  V+A
Sbjct:  274 PIPMAIDAADIVNYYR-GVISS--CENNGL--NHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVLA 356          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = -3
Query:  365 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 607
            P++VAFEV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG++GYF++  G + C I + A
Sbjct:  369 PMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIA 454          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  332 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 607
            PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  267 PVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = -3
Query:  350 AVGLV*PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 625
            AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  238 AVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = -3
Query:  365 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 607
            P++VAFEV D F  Y+ GVY  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG +WG++GYF++  G + C I + A
Sbjct:  369 PMAVAFEVYDDFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIA 454          
The following BLAST results are available for this feature:
BLAST of DN617297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATL1_CANFA2.433e-1646.39Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATC_MOUSE4.150e-1647.67Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
ACTN_ACTDE4.150e-1646.07Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATL1_RAT5.420e-1644.90Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
ACTN_ACTCH5.420e-1647.19Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATV_NPVLD7.078e-1646.59Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATC_HUMAN7.078e-1645.35Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CYSP2_HORVU9.245e-1646.94Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATL1_MOUSE9.245e-1645.92Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATC_BOVIN9.245e-1645.35Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617297 ID=DN617297; Name=DN617297; organism=Citrus sinensis; type=EST; length=630bp
TTTTTTTTTTTTTTTTTAGGGGCAGAAGACAACCAAATTTTTTAAGCAAT
GCATTGATATTTGCCTAAAGCTTCCATATAACAACTACCTTGCATTGACA
AAATATATATAACATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGG
ACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTAT
TGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCA
ACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAA
TGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCC
ACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCAT
CTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCT
TAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACG
ACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTA
AACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACAC
TCACAGGTCAAACAAGACCAACTGCATGCT
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