DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_ECOLI (Putative peroxiredoxin bcp OS=Escherichia coli (strain K12) GN=bcp PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = -3
Query:  203 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQ 631
            G   P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L+
Sbjct:    7 GDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWLK 153          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_ECOL6 (Putative peroxiredoxin bcp OS=Escherichia coli O6 GN=bcp PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = -3
Query:  203 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQ 631
            G   P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L+
Sbjct:    7 GDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWLK 153          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_ECO57 (Putative peroxiredoxin bcp OS=Escherichia coli O157:H7 GN=bcp PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = -3
Query:  203 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQ 631
            G   P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L+
Sbjct:    7 GDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWLK 153          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_BACSU (Putative peroxiredoxin ygaF OS=Bacillus subtilis GN=ygaF PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23
Identity = 59/149 (39.60%), Postives = 86/149 (57.72%), Query Frame = -3
Query:  203 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKE---WGVPADFFGSLPG--RQTYVLDKNGVVQLIYN-NQFQPEKHIDETLKFLQ 631
            GQ  P   LK   G  V LS +KGK +V+YFYP D TPGCT +AC FRDS+E F +  A +IG+S D    H  F +K+ LP+ LL D+ +K+ +    W +  +F     G  R T+++DK G  +LI    + + + H+ E L+ L+
Sbjct:    6 GQKAPDLELKGDHGETVKLSDYKGKYIVLYFYPKDMTPGCTTEACDFRDSHESFAELDAVIIGVSPDSQEKHGKFKEKHNLPFLLLVDDEHKLAEAFDVWKLKKNFGKEYMGIERSTFLIDKEG--RLIKEWRKVKVKDHVAEALQTLK 152          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_HAEIN (Putative peroxiredoxin bcp OS=Haemophilus influenzae GN=bcp PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.656e-19
Identity = 55/152 (36.18%), Postives = 90/152 (59.21%), Query Frame = -3
Query:  200 VSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD--FFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 640
            +S G   P+FTL +Q+ + VSLS F+GK V++YFYP   TPGCT QAC  RDS  +    G  V+GIS D       F +K  L +TLLSD  ++V +++GV  +  F G       R +++++++G +  ++ ++F+ + H    + +L+S
Sbjct:    4 LSVGNQAPAFTLLNQQEKFVSLSDFRGKKVLIYFYPKALTPGCTTQACGLRDSKSELDVLGLVVLGISPDAPKKLAQFIEKKELNFTLLSDPDHQVAEQFGVWGEKKFMGRTYDGIHRISFLINESGTIMQVF-DKFKIKDHHQMIIDYLRS 154          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_BUCAP (Putative peroxiredoxin bcp OS=Buchnera aphidicola subsp. Schizaphis graminum GN=bcp PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD-------FFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F L +   +++ LS F GK V+VYFYP   TPGCT QAC  RD+ E FK    EV+GIS D+++    F +K  L +TLLSD+ N V K++GV  +       +FG    R +++++ +G +  I+  +F+ + H    L +L S
Sbjct:    7 GDIAPKFILPNCIDKSIKLSDFLGKKVLVYFYPKAMTPGCTVQACNIRDNLELFKSKKVEVLGISPDNTNKLLTFVEKKMLNFTLLSDKQNIVSKKFGVWGEKIFMGKKYFGIY--RTSFLINSSGFIDKIF-FKFKCKDHHKIILTYLNS 154          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRX_SCHPO (Peroxiredoxin C1773.02c OS=Schizosaccharomyces pombe GN=SPBC1773.02c PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = -3
Query:  197 SISAKVSKGQAPPSFTLKDQEGRNVSLSKFKG-KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQSS 655
            S+ + +  G   P  TL D++G ++ L      K +V++ YP   TPGCTKQ C FRD+Y K + +  EV+G+S D S + KAF  K   PY LLSD   ++ K+ G      G L  R  ++ +K     ++      P   +D+    +  S
Sbjct:   41 SVDSTIQVGDVIPDITLPDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGCGFRDNYPKIQASDYEVLGLSFDTSKAQKAFKDKQNFPYHLLSDPKGELIKKLGAEKPGGGKL-FRSHWIFEKGTGKCIVKEIDISPLVSVDKAFAVITDS 193          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_HELPJ (Putative peroxiredoxin bcp OS=Helicobacter pylori J99 GN=bcp PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = -3
Query:  206 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVR---KEWGVPADFFGSLPG--RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 643
            K+  GQ  P F LK+ +G  +SL     K VV+YFYP D TPGCT +A  F   + +F+K  A V+G+S D+S SH+ F  +  L   LL DE  KV    K +G    +     G  R T++++  GV++  + N  + + H  + L+ L
Sbjct:    3 KLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGVSPDNSQSHQKFISQCSLNVILLCDEDKKVANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYN-VKAKGHAQKVLESL 152          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BCP_HELPY (Putative peroxiredoxin bcp OS=Helicobacter pylori GN=bcp PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -3
Query:  206 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNK---VRKEWGVPADFFGSLPG--RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 643
            K+  GQ  P F LK+ +G  +SL     K VV+YFYP D TPGCT +A  F   + +F+K  A V+GIS D++ SH+ F  +  L   LL DE  K   + K +G    +     G  R T++++  GV++  + N  + + H  + L+ L
Sbjct:    3 KLEVGQLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGISPDNAQSHQKFISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYN-VKAKGHAQKVLESL 152          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE  NV LS + GK  V+++FYP D T  C  +  AF D +E+F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DETL+ LQ+
Sbjct:   21 GNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQA 174          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
BCP_ECOLI8.483e-2439.86Putative peroxiredoxin bcp OS=Escherichia coli (st... [more]
BCP_ECOL68.483e-2439.86Putative peroxiredoxin bcp OS=Escherichia coli O6 ... [more]
BCP_ECO578.483e-2439.86Putative peroxiredoxin bcp OS=Escherichia coli O15... [more]
BCP_BACSU7.181e-2339.60Putative peroxiredoxin ygaF OS=Bacillus subtilis G... [more]
BCP_HAEIN1.656e-1936.18Putative peroxiredoxin bcp OS=Haemophilus influenz... [more]
BCP_BUCAP4.817e-1937.75Putative peroxiredoxin bcp OS=Buchnera aphidicola ... [more]
PRX_SCHPO1.186e-1732.47Peroxiredoxin C1773.02c OS=Schizosaccharomyces pom... [more]
BCP_HELPJ2.643e-1735.76Putative peroxiredoxin bcp OS=Helicobacter pylori ... [more]
BCP_HELPY1.312e-1635.10Putative peroxiredoxin bcp OS=Helicobacter pylori ... [more]
BAS1_HORVU3.231e-1535.482-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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