DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: YCF42_PORYE (Putative peroxiredoxin ycf42 OS=Porphyra yezoensis GN=ycf42 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = -3
Query:  200 GQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            GQ  P F+   + DQE + + LS  K K +V++FYP D T  C  +  AF D Y  F +   EV+G+S D   SH A+ +  R       L Y L+SD   ++   + V      +L G   +++D  G++Q    N  +  + ++ETL+ LQ+
Sbjct:   11 GQLAPDFSATAVYDQEFKTLKLSDLKNKYIVLFFYPLDFTFVCPTEITAFSDKYNAFSELNTEVLGVSVDSEYSHLAWLQTDRESGGLGDLSYPLVSDLKKEISAAYNVLNSDGVALRG--LFIIDPKGIIQYSTINNLEFGRSVEETLRVLQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_MOUSE (Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = -3
Query:  200 SAKVSKGQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G++ P FT   + D   + + LS ++GK VV++FYP D T  C  +  AF D  E F+K G EV+G+S D   +H A+    R       L   LL+D    + + +GV  +  G +  R  +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    3 SGNAQIGKSAPDFTATAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEG-IAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDX_ECHGR (Thioredoxin peroxidase OS=Echinococcus granulosus GN=TPX PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  PSFT K   D E ++VSLS ++GK V+++FYP D T  C  +  AF D  ++F + G +++  S D    H A+    R       +   +L+D  +K+ +++GV  +  G +  R  +++D  GV++ I  N     + +DE L+ L +
Sbjct:    6 GKLAPSFTCKALVDGELKDVSLSDYRGKYVILFFYPMDFTFVCPTEIIAFNDRADEFHQRGCQLLACSTDSGYCHLAWNNVSRKEGGVQGMRIPMLADTNHKISRDYGVLIEDQG-IALRGLFIIDDKGVLRQITINDLPVGRSVDEALRLLDA 158          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = -3
Query:  200 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 637
            S G+  P   +    G+      F+GK  V++ +PAD TP CT +  AF   YE FKK   E+IG+S D + SH  +A+  +      +P+ +++D   +V K+ G+      +   R  +V+D  GVV+ I     +  ++IDE L+ ++S
Sbjct:    7 SIGEKFPEIEVMTTHGKIKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKLGVEIPFPIIADPTGEVAKKLGLLHAQSSTATVRAVFVVDDKGVVRAILYYPQEVGRNIDEILRLIES 158          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE   V LS + GK  V+++FYP D T  C  +  AF D + +F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ LQ+
Sbjct:   76 GNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQA 229          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE   V LS + GK  V+++FYP D T  C  +  AF D + +F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ LQ+
Sbjct:   76 GNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQA 229          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_RAT (Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  200 GQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P FT   + D   + + LS ++GK VV++FYP D T  C  +  AF D  E F+K G EV+G+S D   +H A+    R       L   LL+D    + + +GV  +  G +  R  +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    9 GKPAPDFTGTAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEG-IAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 41/150 (27.33%), Postives = 86/150 (57.33%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            GQ  P FT+   +G  V+LS ++GK V+++ +P D TP CT +  AF + Y+ F+  G E++G+S D   SH A+ +  +      +P+ +++D   +V +++ +  +  G+   R  +++D N +V+ +     +  ++IDE ++ +++
Sbjct:    2 GQKAPDFTVNTSKGP-VTLSSYRGKWVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHFGIEIPFPIIADIDKEVARQYNLIDEKSGATV-RGVFIIDPNQIVRWMIYYPAETGRNIDEIIRVIKA 149          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 43/154 (27.92%), Postives = 83/154 (53.90%), Query Frame = -3
Query:  188 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQSS*TS 631
            G+  P   +K   G+ +    F+GK  V++ +PAD TP CT +  AF+  Y++FKK   E+IG+S D   SH  + +  +      + + +++D+  +V +  G+     G+   R  +++D NG+++ I     +  ++IDE L+ +++  TS
Sbjct:    9 GEEFPRLEVKTTHGKKILPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKLGVEIEFPVIADDLGEVSRRLGLIHPSKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVRALQTS 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_HUMAN (Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   P+F     + D + +++SLS +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DETL+ +Q+
Sbjct:    3 SGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQA 162          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
YCF42_PORYE1.039e-1331.82Putative peroxiredoxin ycf42 OS=Porphyra yezoensis... [more]
PRDX2_MOUSE1.039e-1331.25Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3[more]
TDX_ECHGR1.357e-1330.52Thioredoxin peroxidase OS=Echinococcus granulosus ... [more]
TDXH_HYPBU1.357e-1330.92Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
BAS1_SPIOL1.357e-1334.192-Cys peroxiredoxin BAS1, chloroplastic OS=Spinaci... [more]
BAS1A_ARATH1.357e-1334.192-Cys peroxiredoxin BAS1, chloroplastic OS=Arabido... [more]
PRDX2_RAT2.315e-1331.82Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1... [more]
TDXH2_THEAC3.024e-1327.33Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]
TDXH_THEP13.950e-1327.92Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
PRDX1_HUMAN3.950e-1330.86Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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