DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_MYOLU (Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   P+F     + D + +++SLS +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DETL+ +Q+
Sbjct:    3 SGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKINCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 45/150 (30.00%), Postives = 77/150 (51.33%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH---KAFAKK---YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P   +    G       +KGK +V++ +PAD TP CT +  AF   YE FKK   E++G+S D+S SH   K + K+     +P+ +++D   +V  + G+     G +  R  +++D  G V+ I        ++IDE L+ L++
Sbjct:    9 GEKLPEMVVHTDHGPKKLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKEKLNVEIPFPIIADPLGQVATKLGMLHPEGGVVTVRAVFIVDPEGKVRAILYYPLNVGRNIDEILRLLKA 158          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_GECJA (Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = -3
Query:  200 GQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P F     + D + + + LS +KGK VV++FYP D T  C  +  AF D  E+F+K   EVIG S D    H A+    +       +   L+SD    + K++G+  +  G +  R  +++D  G ++ I  N     + +DETL+ +Q+
Sbjct:    9 GKLAPDFQATAVMPDGQFKEIKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRSEEFRKINCEVIGASVDSHFCHLAWINTPKKQGGLGSMHIPLVSDTKRVIAKDYGILKEDEG-ISYRGLFIIDDKGTLRQITINDLPVGRSVDETLRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P   +  Q G+      FKGK  V++ +PAD TP CT +  AF   YE FKK   E+IG+S D + SH  + +  +      +P+ +++D    V  + G+      +   R  +V+D NG+++ I        ++IDE L+ +++
Sbjct:    9 GEKFPEMEVVTQHGKIKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGVEIPFPIMADPRGTVASKLGMLHAASSTHTVRAVFVIDPNGIIRAIIYYPLDNGRNIDEILRLVKA 158          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_MACFA (Peroxiredoxin-2 OS=Macaca fascicularis GN=PRDX2 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  200 GQAPPSF---TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P F    + D   + V LS +KGK VV++FYP D T  C  +  AF +  E F+K G EV+G+S D   +H A+    R       L   LL+D   ++ +++GV     G +  R  +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    9 GKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEG-IAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_HUMAN (Peroxiredoxin-2 OS=Homo sapiens GN=PRDX2 PE=1 SV=5)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  200 GQAPPSF---TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P F    + D   + V LS +KGK VV++FYP D T  C  +  AF +  E F+K G EV+G+S D   +H A+    R       L   LL+D   ++ +++GV     G +  R  +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    9 GKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEG-IAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 43/154 (27.92%), Postives = 83/154 (53.90%), Query Frame = -3
Query:  188 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQSS*TS 631
            G+  P   +K   G+ V    F+GK  V++ +PAD TP CT +  AF+  Y++F+K   E+IG+S D   SH  + +  +      + + +++D+  +V +  G+     G+   R  +++D NG+++ I     +  ++IDE L+ +++  TS
Sbjct:    9 GEEFPRVEVKTTHGKKVLPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKLGVEIEFPVIADDLGEVSRRLGLIHPNKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVKALQTS 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_BOVIN (Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = -3
Query:  200 KVSKGQAPPSF---TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 643
            K   G+  P F    + D   + V LS +KGK VV++FYP D T  C  +  AF D   +F K   EV+G+S D   +H A+    R       L   LL+D   K+  ++GV  +  G +  R  +V+D  GV++ +  N     + +DE L+ +Q+
Sbjct:    6 KAHVGKPAPEFQATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRAAEFHKLNCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRKLSSDYGVLKEDEG-IAYRGLFVIDGKGVLRQVTINDLPVGRSVDEALRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_RAT (Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 50/162 (30.86%), Postives = 80/162 (49.38%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   PSF     + D + +++SLS +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DE L+ +Q+
Sbjct:    3 SGNAKIGHPAPSFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_BOVIN (Peroxiredoxin-1 OS=Bos taurus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   P F     + D + +++SL+ +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DETL+ +Q+
Sbjct:    3 SGNAKIGHRAPQFKATAVMPDGQFKDISLADYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQA 162          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PRDX1_MYOLU5.158e-1330.86Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 ... [more]
TDXH_IGNH46.737e-1330.00Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]
PRDX1_GECJA6.737e-1330.32Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 S... [more]
TDXH_STAMF8.799e-1329.33Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
PRDX2_MACFA8.799e-1331.82Peroxiredoxin-2 OS=Macaca fascicularis GN=PRDX2 PE... [more]
PRDX2_HUMAN8.799e-1331.82Peroxiredoxin-2 OS=Homo sapiens GN=PRDX2 PE=1 SV=5[more]
TDXH_THEMA1.149e-1227.92Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
PRDX2_BOVIN1.149e-1231.65Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1[more]
PRDX1_RAT1.149e-1230.86Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1... [more]
PRDX1_BOVIN1.149e-1230.25Peroxiredoxin-1 OS=Bos taurus GN=PRDX1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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