DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAK------KYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P   +   +GR      +KG+  V++ +P D TP CT +  +F   YE+FKK   E+IG+S D + SH  +        K  +P+ +++D    V K  G+      +   R  +V+D  GVV+LI     +  ++IDE L+ +++
Sbjct:   10 GERFPEMEVITTQGRIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLKVEIPFPIIADPMGNVAKRLGMIHAQSSTATVRAVFVVDDKGVVRLILYYPMEIGRNIDEILRAIRA 159          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX3_MOUSE (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus GN=Prdx3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E + +SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +  TLLSD   ++ +++GV  +  G +  R  +++D NGVV+ +  N     + ++ETL+ +++
Sbjct:   82 EFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDITKQISRDYGVLLESAG-IALRGLFIIDPNGVVKHLSVNDLPVGRSVEETLRLVKA 219          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_CRIGR (Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = -3
Query:  200 GQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P FT   + D   + V LS ++GK VV++FYP D T  C  +  AF +  E F+K G EV+G+S D   +H A+    R       L   LL+D    + + +GV     G +  R  +++D  G+++ I  N     + +DE L+ +Q+
Sbjct:    9 GKPAPDFTATAVVDGAFKEVKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSNHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRSLSENYGVLKTDEG-IAYRGLFIIDAKGILRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX2_PONAB (Peroxiredoxin-2 OS=Pongo abelii GN=PRDX2 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = -3
Query:  200 GQAPPSF---TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P F    + D   + V LS +KGK VV++FYP D T  C  +  AF +  E F K G EV+G+S D   +H A+    R       L   LL+D   ++ +++GV     G +  R  +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    9 GKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFHKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEG-IAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 161          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_DROME (Peroxiredoxin 1 OS=Drosophila melanogaster GN=Jafrac1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = -3
Query:  200 RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 589
            +++ LS +KGK +V++FYP D T  C  +  AF +S  +F+K   EVIG S D   +H A+    R       +   LL+D+  KV +++GV  +  G +P R  +++D    ++ I  N     + ++ETL+ +Q+
Sbjct:   22 KDIKLSDYKGKYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCEVIGCSTDSQFTHLAWINTPRKQGGLGSMDIPLLADKSMKVARDYGVLDEETG-IPFRGLFIIDDKQNLRQITVNDLPVGRSVEETLRLVQA 157          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12
Identity = 43/152 (28.29%), Postives = 81/152 (53.29%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGV--PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P+F  +   G       FKG+ VV++ +PAD TP CT +  AF  +YE+FKK   ++IG+S D + SH A+    +      +P+ +++D   +V K++G+  PA    +   R  +V+D  G+++ +        ++I E ++ + +
Sbjct:   10 GEPAPAFEAQTTFGPVKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKFGIEIPFPIIADHNMEVAKKYGMIHPAQ-STTFTVRALFVIDDKGILRAMIYYPLTTGRNIREVIRLVDA 160          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX3_PONAB (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Pongo abelii GN=PRDX3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E +++SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +++
Sbjct:   81 EFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 218          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX3_HUMAN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Homo sapiens GN=PRDX3 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E +++SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +++
Sbjct:   81 EFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 218          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX3_BOVIN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Bos taurus GN=PRDX3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12
Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E + +SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +++
Sbjct:   82 EFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 219          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_MOUSE (Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12
Identity = 47/162 (29.01%), Postives = 81/162 (50.00%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   P+F     + D + +++SLS++KGK VV +FYP D T  C  +  AF D  ++FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DE ++ +Q+
Sbjct:    3 SGNAKIGYPAPNFKATAVMPDGQFKDISLSEYKGKYVVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDEIIRLVQA 162          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TDXH_SULSO1.501e-1229.33Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
PRDX3_MOUSE1.501e-1231.65Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX2_CRIGR1.501e-1231.17Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=... [more]
PRDX2_PONAB1.960e-1231.82Peroxiredoxin-2 OS=Pongo abelii GN=PRDX2 PE=2 SV=3[more]
PRDX1_DROME2.560e-1231.39Peroxiredoxin 1 OS=Drosophila melanogaster GN=Jafr... [more]
TDXH_AQUAE3.343e-1228.29Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
PRDX3_PONAB4.367e-1230.94Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_HUMAN4.367e-1230.94Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_BOVIN5.703e-1230.94Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_MOUSE5.703e-1229.01Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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