DN617287

Overview
NameDN617287
Unique NameDN617287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4014 contig Csv1_Contig4014:187..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_ASHGO (Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 PE=3 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 9.531e-66
Identity = 120/206 (58.25%), Postives = 153/206 (74.27%), Query Frame = 3
Query:  114 KVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT----DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            KV IIGSGP            E+KP L+EG  AN +A GGQLTTT+++ENFPGFP G+ G DLM+R + QS++FGT++ TETV+KVD  +RPFK++T    D +    D +I+ATGA AK+L  PG + +W RGISACAVCDGA PIFR+KPLAV+GGGDSA EEA+FLTKYGSKV+++ R+D  RAS IMQ R   N KI+V++N
Sbjct:    5 KVTIIGSGPAAHTAAIYLARAEIKPTLYEGMFANGVAAGGQLTTTTEIENFPGFPDGLTGSDLMERMKAQSVKFGTEVVTETVAKVDLSARPFKLWTEFNEDEEPTTTDAIILATGASAKRLGLPGEETYWQRGISACAVCDGAVPIFRNKPLAVVGGGDSACEEASFLTKYGSKVFMLVRKDHMRASTIMQRRVERNEKIEVLYN 210          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_PNEJI (Thioredoxin reductase OS=Pneumocystis jiroveci GN=TRR1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.004e-64
Identity = 120/208 (57.69%), Postives = 152/208 (73.08%), Query Frame = 3
Query:  105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL---ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            + +KV IIGSGP            ELKP+L+EG +AN IA GGQLTTT+DVEN+PGFP GI+G  LM++ R QS+++GT I TETVSK+D   RPFK + +S       AD V++ATGA A++L  PG + +W RGISACAVCDGAAPIFR K L+V+GGGDSA EE+ FLT+Y +KVY++ RRD  RAS +M  R L +PKI+VIWN
Sbjct:    1 MHSKVIIIGSGPAGHTAAIYLARAELKPVLYEGMLANGIAAGGQLTTTTDVENYPGFPDGIMGPLLMEKFREQSVKYGTCIITETVSKLDLSKRPFKYWCESDENTCHTADVVVMATGAYARRLHIPGEETYWQRGISACAVCDGAAPIFRGKCLSVVGGGDSAAEESLFLTRYATKVYLLVRRDKLRASAVMAKRLLNHPKIEVIWN 208          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_NEUCR (Thioredoxin reductase OS=Neurospora crassa GN=cys-9 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.424e-61
Identity = 118/208 (56.73%), Postives = 151/208 (72.60%), Query Frame = 3
Query:  105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTD---SKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            + +KV IIGSGP            ELKP+L+EG+MAN IA GGQLTTT+++ENFPGFP GI+G +LMD+ + QS RFGTQI +ETV+KVD  +RPFK  T+    +   AD++I+ATGA A++L  PG + +W  GISACAVCDGA PIFR+K L VIGGGDSA EEA +LTKYGS V ++ R+D  RAS IM +R L + K+ V +N
Sbjct:    1 MHSKVVIIGSGPAAHTAAIYLARAELKPVLYEGFMANGIAAGGQLTTTTEIENFPGFPDGIMGQELMDKMKAQSERFGTQIISETVAKVDLSARPFKYATEWSPEEYHTADSIILATGASARRLHLPGEEKYWQNGISACAVCDGAVPIFRNKHLVVIGGGDSAAEEAMYLTKYGSHVTVLVRKDKLRASSIMAHRLLNHEKVTVRFN 208          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_PENCH (Thioredoxin reductase OS=Penicillium chrysogenum GN=TRR1 PE=1 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 4.144e-61
Identity = 122/210 (58.10%), Postives = 148/210 (70.48%), Query Frame = 3
Query:  111 TKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTD------SKSV-LADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            +KV IIGSG             EL+P+L+EG +AN  A GGQLTTT+DVENFPGFP GI G +LMD  R QS RFGT+I TET+SK+D  SRPFK++T+      S+ V  AD VI+ATGA A++L  PG + +W  GISACAVCDGA PIFR+KPL VIGGGDSA EEA FL KYGS V ++ R+D  RAS IM +R L +PK  V +N
Sbjct:    4 SKVVIIGSGAGAHTAAIYLSRAELQPVLYEGMLANGTAAGGQLTTTTDVENFPGFPSGIGGAELMDNMRAQSERFGTEIITETISKLDLSSRPFKMWTEWNDDEGSEPVRTADAVIIATGANARRLNLPGEETYWQNGISACAVCDGAVPIFRNKPLYVIGGGDSAAEEAMFLAKYGSSVTVLVRKDKLRASNIMADRLLAHPKCKVRFN 213          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_DICDI (Thioredoxin reductase OS=Dictyostelium discoideum GN=trrA PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.066e-59
Identity = 107/205 (52.20%), Postives = 147/205 (71.71%), Query Frame = 3
Query:  114 KVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            KV IIGSGP             L+P++FEG+MA  +A GGQLTTT+++ENFPGFP  I G +LMD+ R Q+++ GT I T+T+SKVD K RPF ++ +    K + A ++I+ATGA AK++  PG   FW++G+SACAVCDGA PI+R+K L V+GGGD+A EEA FLT + SKV ++ RR+  RASK MQ +  +NPKI+V+W+
Sbjct:    8 KVVIIGSGPAGHTAGIYAGRARLEPLMFEGFMAGGVAAGGQLTTTTEIENFPGFPIDISGSELMDKMREQNIKCGTTIETKTISKVDLKQRPFTIYVEDEEDKPIKAQSIIIATGATAKRMGVPGETEFWSKGVSACAVCDGALPIYRNKHLVVVGGGDTAAEEATFLTHFASKVTLLVRRNVMRASKAMQQKVFSNPKIEVLWD 212          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_CHLTR (Thioredoxin reductase OS=Chlamydia trachomatis GN=trxB PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.741e-57
Identity = 106/204 (51.96%), Postives = 144/204 (70.59%), Query Frame = 3
Query:  114 KVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGS--DAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            K+ IIGSGP             L P+LFEG+ +     GGQL TT++VENFPGFP+G+LG  LMD  + Q+ RFGTQ+ ++ ++ VDF  RPF + +  ++   D  I+ATGA AK+L  PG+  + FW +G++ACAVCDGA+PIFRDK L V+GGGDSA+EEA FLT+YG +V+++HRRD+ RASK+M N+A  N KI  +WN
Sbjct:    5 KLVIIGSGPAGYTAAIYASRALLTPVLFEGFFSG--IAGGQLMTTTEVENFPGFPEGVLGHQLMDLMKTQAQRFGTQVLSKDITAVDFSVRPFVLKSGKETFTCDACIIATGASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDKDLFVVGGGDSALEEAMFLTRYGKRVFVVHRRDTLRASKVMVNKAQANEKIFFLWN 206          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_CHLMU (Thioredoxin reductase OS=Chlamydia muridarum GN=trxB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.073e-56
Identity = 107/204 (52.45%), Postives = 141/204 (69.12%), Query Frame = 3
Query:  114 KVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGS--DAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            K+ IIGSGP             L PILFEG+ +     GGQL TT++VENFPGFPQG+LG  LM+  + Q+ RFGTQ+  + ++ VDF  RPF + +   +   D  I+ATGA AK+L  PG+  + FW +G++ACAVCDGA+PIFRD+ L VIGGGDSA+EEA FLT+YG +V+++HRRD+ RASK M N+A  N KI  +WN
Sbjct:    5 KLAIIGSGPAGYTAAIYASRALLTPILFEGFFSG--IAGGQLMTTTEVENFPGFPQGVLGHQLMENMKMQAQRFGTQVIAKDITSVDFSVRPFVLKSGEDTFTCDACIIATGASAKRLSIPGAGDNEFWQKGVTACAVCDGASPIFRDRDLFVIGGGDSALEEAMFLTRYGKRVFVVHRRDTLRASKAMVNKAQANEKIVFLWN 206          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_CHLPN (Thioredoxin reductase OS=Chlamydia pneumoniae GN=trxB PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.438e-55
Identity = 105/207 (50.72%), Postives = 143/207 (69.08%), Query Frame = 3
Query:  105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGS--DAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            + +++ IIGSGP             L P+LFEG+ +     GGQL TT++VENFPGFP+GILG  LM+  + Q++RFGT+   + +  VDF  RPF + +  ++   D  I+ATGA AK+L+ PG+  D FW +G++ACAVCDGA+PIF++K L VIGGGDSA+EEA +LT+YGS VY++HRRD  RASK M+ RA  N KI  +WN
Sbjct:    2 IHSRLIIIGSGPSGYTAAIYASRALLHPLLFEGFFSG--ISGGQLMTTTEVENFPGFPEGILGPKLMNNMKEQAVRFGTKTLAQDIISVDFSVRPFILKSKEETYSCDACIIATGASAKRLEIPGAGNDEFWQKGVTACAVCDGASPIFKNKDLYVIGGGDSALEEALYLTRYGSHVYVVHRRDKLRASKAMEARAQNNEKITFLWN 206          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_RICBR (Thioredoxin reductase OS=Rickettsia bellii (strain RML369-C) GN=trxB PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.388e-46
Identity = 99/206 (48.06%), Postives = 130/206 (63.11%), Query Frame = 3
Query:  105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            + TKV IIGSGP             L PIL  G     I PGGQLT T+DVEN+PGF + + G  LM++ R Q+   GT+I  + V KVD   RPFKV T S++   A+++I+ TGA A+ L  P    F   G+SACA CDG    F+++ + V+GGG+SA+EEA +LT + SKV I+HRRD+FRA KI+Q R   NPKI VIW+
Sbjct:    3 ITTKVLIIGSGPAGLSAAIYAARASLNPILING-----IQPGGQLTITTDVENYPGFAESVQGPWLMEQMRMQAENVGTKIVNDYVEKVDLSQRPFKVSTGSRTEYEAESIIICTGAEARWLGIPTEQEFMGFGVSACATCDGF--FFKNQKVVVVGGGNSAVEEALYLTNHASKVTIVHRRDNFRAEKILQERLFKNPKISVIWD 201          
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_RICFE (Thioredoxin reductase OS=Rickettsia felis GN=trxB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.441e-45
Identity = 99/206 (48.06%), Postives = 130/206 (63.11%), Query Frame = 3
Query:  105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719
            + TKV IIGSGP             LKPIL  G     + PGGQLT T+DVEN+PGF + + G  LM++   Q+   GT+I ++ V KVD   RPFKVFT + +   A+++I+ TGA AK L       F   G+SACA CDG    F+++ + V+GGG+SA+EEA +LT + SKV I HRRDSFRA KI+Q+R   NPKI VIW+
Sbjct:    3 ITTKVLIIGSGPAGLSAAIYTARAALKPILING-----MQPGGQLTITTDVENYPGFAETVQGPWLMEQMSMQAKNVGTEIISDYVEKVDLSKRPFKVFTGAGNEYEAESIIICTGAEAKWLSIASEQEFRGFGVSACATCDGF--FFKNQEIVVVGGGNSAVEEALYLTNHASKVTITHRRDSFRAEKILQDRLFKNPKISVIWD 201          
The following BLAST results are available for this feature:
BLAST of DN617287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
TRXB_ASHGO9.531e-6658.25Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 P... [more]
TRXB_PNEJI4.004e-6457.69Thioredoxin reductase OS=Pneumocystis jiroveci GN=... [more]
TRXB_NEUCR1.424e-6156.73Thioredoxin reductase OS=Neurospora crassa GN=cys-... [more]
TRXB_PENCH4.144e-6158.10Thioredoxin reductase OS=Penicillium chrysogenum G... [more]
TRXB_DICDI5.066e-5952.20Thioredoxin reductase OS=Dictyostelium discoideum ... [more]
TRXB_CHLTR4.741e-5751.96Thioredoxin reductase OS=Chlamydia trachomatis GN=... [more]
TRXB_CHLMU3.073e-5652.45Thioredoxin reductase OS=Chlamydia muridarum GN=tr... [more]
TRXB_CHLPN4.438e-5550.72Thioredoxin reductase OS=Chlamydia pneumoniae GN=t... [more]
TRXB_RICBR8.388e-4648.06Thioredoxin reductase OS=Rickettsia bellii (strain... [more]
TRXB_RICFE2.441e-4548.06Thioredoxin reductase OS=Rickettsia felis GN=trxB ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617287 ID=DN617287; Name=DN617287; organism=Citrus sinensis; type=EST; length=720bp
GAACCTTTTTTGGAATTGTAACTACTTCCTCCGCCGCGGCCGCCGCTTCT
TTTTCCGCAACCACCGCTCCCAAGATCAGCAACGCCATGGACGAAATACA
AACCCTCAAGACCAAAGTCTGCATCATTGGCAGCGGCCCCGCCGCCCACA
CTGCCGCCATCTATGCCGCCCGAGCCGAGCTCAAACCCATTCTCTTCGAG
GGCTGGATGGCCAATGATATTGCGCCTGGTGGCCAACTCACCACCACCTC
CGACGTCGAGAATTTCCCCGGTTTTCCCCAGGGCATTCTCGGGGGCGACT
TGATGGATCGCTGCCGCAACCAGTCTCTCCGTTTCGGCACCCAGATTTTT
ACCGAGACCGTTTCCAAAGTCGACTTCAAATCCCGCCCTTTTAAAGTTTT
TACAGATTCCAAATCCGTTCTTGCTGATACTGTTATTGTCGCCACCGGCG
CCGTTGCCAAAAAGTTGCAATTCCCCGGTTCAGATGCGTTCTGGAACCGT
GGCATATCGGCCTGCGCAGTGTGTGATGGAGCCGCTCCGATATTTCGGGA
CAAACCCTTGGCCGTGATTGGTGGCGGGGATTCAGCCATGGAAGAAGCCA
ACTTTTTGACAAAGTACGGATCAAAAGTTTATATAATTCATAGGAGGGAT
AGTTTTAGAGCTTCGAAGATTATGCAAAACAGGGCACTTACGAACCCTAA
GATTGATGTGATTTGGAATT
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