DN617283

Overview
NameDN617283
Unique NameDN617283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11228 contig Csv1_Contig11228:20..501. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC2 (Elongation factor Tu OS=Bacillus cereus (strain G9842) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC1 (Elongation factor Tu OS=Bacillus cereus (strain ATCC 10987) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC0 (Elongation factor Tu OS=Bacillus cereus (strain AH820) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACAN (Elongation factor Tu OS=Bacillus anthracis GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACAH (Elongation factor Tu OS=Bacillus thuringiensis (strain Al Hakam) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACAC (Elongation factor Tu OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACAA (Elongation factor Tu OS=Bacillus anthracis (strain A0248) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_AZOPC (Elongation factor Tu OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   L       ++ F++               +D    E+ERGITI+ A  ++ET   +   +D PGH D++KNM+TG +Q D A++++ +T G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITAVLAKKGLSEVKSFDQ---------------IDNAPEEKERGITINTAHVEYETETRHYAHVDCPGHADYVKNMVTGAAQMDGAIIVVAATDG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_ANOFW (Elongation factor Tu OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   L    K     +++               +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAKQGKAEARAYDQ---------------IDAAPEERERGITISTAHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_AERS4 (Elongation factor Tu OS=Aeromonas salmonicida (strain A449) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+N+  IGHVD GK+T T  +   L              A     ++F +  + DK   ERERGITI+ +  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G
Sbjct:    8 RNKPHVNVGTIGHVDHGKTTLTAAITNVL--------------AKHFGGKAFAFDQI-DKAPEERERGITINTSHVEYDTAIRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 111          
The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BACC27.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain G9... [more]
EFTU_BACC17.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain AT... [more]
EFTU_BACC07.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACAN7.276e-1536.07Elongation factor Tu OS=Bacillus anthracis GN=tuf ... [more]
EFTU_BACAH7.276e-1536.07Elongation factor Tu OS=Bacillus thuringiensis (st... [more]
EFTU_BACAC7.276e-1536.07Elongation factor Tu OS=Bacillus anthracis (strain... [more]
EFTU_BACAA7.276e-1536.07Elongation factor Tu OS=Bacillus anthracis (strain... [more]
EFTU_AZOPC7.276e-1534.45Elongation factor Tu OS=Azobacteroides pseudotrich... [more]
EFTU_ANOFW7.276e-1536.13Elongation factor Tu OS=Anoxybacillus flavithermus... [more]
EFTU_AERS47.276e-1536.13Elongation factor Tu OS=Aeromonas salmonicida (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bp
CAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTTA
ATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACATCA
ACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGA
CACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTT
CGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGG
TGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATT
GCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGC
TCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGG
CTGACTGTGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAGCT
GGTATCTCCAAGGATGGTCAGACTCGTGAGCA
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