DN135279

Overview
NameDN135279
Unique NameDN135279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CANGA (Cytochrome c oxidase subunit 2 OS=Candida glabrata GN=COX2 PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.970e-31
Identity = 72/164 (43.90%), Postives = 100/164 (60.98%), Query Frame = 3
Query:  165 IVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653
            ++ LL  LFL +   D   P+ + FQD+ATP  +G                          +    Y KNP+  + + HG TIEI+WT+FP++IL+ IA PSF LLY  DEV+  PA+TIKAIG+QWYW YEYSD+ + + +++ F+SY+IP+D LE GQLRLL
Sbjct:    1 MLNLLNTLFLNVISNDVPTPYGIYFQDSATPNQEGILELHDNIMFYLFIILGLVSWMLFTIVKT--YSKNPMAYKYIKHGQTIEIIWTMFPAVILLIIAFPSFILLYLCDEVI-SPAMTIKAIGYQWYWKYEYSDFINDNGETIEFESYVIPDDLLEEGQLRLL 161          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_VANPO (Cytochrome c oxidase subunit 2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=COX2 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.446e-30
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 3
Query:  192 LTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFH-----YKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653
            L+I   D   P+ LGFQD+ATP  +G                           W  +     Y KNP+P + + HG  IEI+WTIFP+++L+ IA PSF LLY  DEV+  PA+T+K IG+QWYW YEYSD+ +S+ +++ F+SY+IP+D LE GQLRLL
Sbjct:    8 LSIISNDVPTPYALGFQDSATPNQEGILELHDNIMFYLLVILGLVS-------WMLYTITKTYSKNPLPYKYMKHGQFIEIIWTIFPAVVLLIIAFPSFILLYLCDEVI-SPAMTVKVIGYQWYWKYEYSDFVNSNGETVEFESYIIPDDLLEEGQLRLL 159          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PNECA (Cytochrome c oxidase subunit 2 OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.889e-30
Identity = 69/150 (46.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query:  210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659
            DA  PW + FQD A+P+  G                          +  F      + +   H TTIE +WT+ P+++L+ IA PSF LLY MDEV+ DP+ITIKAIGHQWYW+YEYSDY   + QS+ FDSYM+P +DLE GQLR L V
Sbjct:    8 DAPTPWGIYFQDGASPVYDGIVELHDQVLFYLLIVLVGVSWILFSTILRFR-GSGIVHKYHNHSTTIEFVWTVSPALLLIAIAFPSFKLLYLMDEVI-DPSITIKAIGHQWYWSYEYSDYTDKEGQSIEFDSYMLPTEDLEEGQLRQLEV 155          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_NEUCR (Cytochrome c oxidase subunit 2 OS=Neurospora crassa GN=cox-2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 3
Query:  210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659
            DA  PW + FQD+ATP M+G                       +  + ++   K+PI  + + HGT IE++WTI P++IL+ IA PSF LLY MDEV  DP++++ A GHQWYW+Y+Y D+  S+++ + FDSY++PE DLE G LR+L V
Sbjct:   13 DAPSPWGIYFQDSATPQMEGLVELHDNIMYYLVVILFVVGWILLSIIRNYISTKSPISHKYLNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVS-DPSMSVLAEGHQWYWSYQYPDFLDSNDEFIEFDSYIVPESDLEEGALRMLEV 162          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_TRIRU (Cytochrome c oxidase subunit 2 OS=Trichophyton rubrum GN=COX2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.207e-30
Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  213 AAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659
            A  PW L FQD+ATP M+G                       +  +  F   K+PI  + + HGT IE++WTI P++IL+ IA PSF LLY MDEV+ DP++ I   GHQWYW+Y+Y D+ ++D + + FDSY++PE DLE G LR+L V
Sbjct:    5 APTPWGLFFQDSATPQMEGIEELHNNIMFYLTIILFSVTWMMITIIKSFVNTKSPISHKYMNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVM-DPSLVIYGEGHQWYWSYQYPDFTNADGEFVEFDSYIVPESDLEEGTLRMLEV 153          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PODAN (Cytochrome c oxidase subunit 2 OS=Podospora anserina GN=COII PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 3
Query:  210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659
            DA  PW + FQD+ATP M+G                       +  + ++   K+PI  + + HGT IE++WTI P++IL+ IA PSF LLY MDEV  DP++++ A GHQWYW+Y+Y D+  S++Q + FDSY++PE DL+ G LR+L V
Sbjct:   13 DAPSPWGIYFQDSATPQMEGLNELHDNIMYYLVVILFAVGWILLSIVINYVSTKSPISHKYLNHGTLIELIWTITPAVILILIAFPSFKLLYLMDEVS-DPSMSVLAEGHQWYWSYQYPDFLDSNDQFIEFDSYIVPESDLDEGGLRMLEV 162          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: M1280_ARATH (Uncharacterized mitochondrial protein AtMg01280 OS=Arabidopsis thaliana GN=AtMg01280 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 65/101 (64.36%), Postives = 70/101 (69.31%), Query Frame = 3
Query:  174 LLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFAL 476
            +L+WLFLTI+PCDAAEPWQLG QDAATP+MQG                       VRALWHFHYKKN IPQRIVHGTTIEIL TIFP  I +FI  PSFAL
Sbjct:    3 VLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRALWHFHYKKNAIPQRIVHGTTIEILRTIFPCFISIFIVEPSFAL 103          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_WILSA (Cytochrome c oxidase subunit 2 OS=Williopsis saturnus GN=COX2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 69/149 (46.31%), Postives = 90/149 (60.40%), Query Frame = 3
Query:  210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653
            D   PW L FQD++TP  +G                          +      KNP+P + +VHG TIEI+WTI P+++L+ IA PSF LLY  DEV+  PA+TIKAIG QWYW YEYSD+ +   +++ F+SY+IPED LE GQLRLL
Sbjct:   12 DVPTPWGLYFQDSSTPNQEGIIELHDNIMFYLVLILCTVSWLLFSIVKDS--SKNPLPHKYLVHGQTIEIIWTILPAVVLLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWRYEYSDFINDSGETIEFESYVIPEDLLEDGQLRLL 157          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_WILMR (Cytochrome c oxidase subunit 2 OS=Williopsis mrakii GN=COX2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 69/149 (46.31%), Postives = 90/149 (60.40%), Query Frame = 3
Query:  210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653
            D   PW L FQD++TP  +G                          +      KNP+P + +VHG TIEI+WTI P+++L+ IA PSF LLY  DEV+  PA+TIKAIG QWYW YEYSD+ +   +++ F+SY+IPED LE GQLRLL
Sbjct:   12 DVPTPWGLYFQDSSTPNQEGIIELHDNIMFYLVLILCTVSWLLFSIVKDS--SKNPLPHKYLVHGQTIEIIWTILPAVVLLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWRYEYSDFINDSGETIEFESYVIPEDLLEDGQLRLL 157          
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_KLULA (Cytochrome c oxidase subunit 2 OS=Kluyveromyces lactis GN=COX2 PE=3 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.562e-29
Identity = 72/158 (45.57%), Postives = 95/158 (60.13%), Query Frame = 3
Query:  183 WLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653
            +L  +I   D   P+ + FQD+ATP  +G                          +    Y KNPI  + + HG TIEI+WTIFP++IL+ IA PSF LLY  DEV+  PA+TIKAIG QWYW YEYSD+ + + +++ F+SY+IPED LE GQLRLL
Sbjct:    3 YLLNSIIMNDVPTPYGMYFQDSATPNQEGILELHDNIMFYLFIILGLVSWLLFTIVRT--YSKNPIAYKYIKHGQTIEIIWTIFPAVILLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWKYEYSDFINDNGETVEFESYVIPEDLLEDGQLRLL 157          
The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 302
Match NameE-valueIdentityDescription
COX2_CANGA4.970e-3143.90Cytochrome c oxidase subunit 2 OS=Candida glabrata... [more]
COX2_VANPO1.446e-3044.38Cytochrome c oxidase subunit 2 OS=Vanderwaltozyma ... [more]
COX2_PNECA1.889e-3046.00Cytochrome c oxidase subunit 2 OS=Pneumocystis car... [more]
COX2_NEUCR3.221e-3043.05Cytochrome c oxidase subunit 2 OS=Neurospora crass... [more]
COX2_TRIRU4.207e-3044.00Cytochrome c oxidase subunit 2 OS=Trichophyton rub... [more]
COX2_PODAN5.495e-3043.05Cytochrome c oxidase subunit 2 OS=Podospora anseri... [more]
M1280_ARATH7.176e-3064.36Uncharacterized mitochondrial protein AtMg01280 OS... [more]
COX2_WILSA2.088e-2946.31Cytochrome c oxidase subunit 2 OS=Williopsis satur... [more]
COX2_WILMR2.088e-2946.31Cytochrome c oxidase subunit 2 OS=Williopsis mraki... [more]
COX2_KLULA3.562e-2945.57Cytochrome c oxidase subunit 2 OS=Kluyveromyces la... [more]

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Properties
Property NameValue
Genbank descriptionwca08h12 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bp
CCGGGGGCAAGNNAAGCTGACTGAGTGTTCATTAATGCCCAAAACTCCCT
NGCCTTTCTTGGTTGGACCAAGGCGATTTCTGTCTTCCTGATTTGGGATA
GTAAGAGTCAGTCTCTCTTTTTTGGGGGGGAGCAGAGCAGTCAAAGAATG
AAGCAAAGCAAATGATTGTTCGTTTACTAGAATGGTTATTCCTTACAATT
GCTCCTTGTGATGCAGCGGAACCGTGGCAATTAGGATTTCAAGACGCAGC
AACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTCTTCT
TTCTCATTCTGATTTTGGTTTTCGTATTATGGATCTTGGTTCGTGCTTTA
TGGCATTTCCATTATAAAAAAAATCCAATCCCGCAAAGGATTGTTCATGG
AACTACTATCGAGATTCTTTGGACCATCTTTCCTAGTATCATCTTGATGT
TCATTGCTATACCATCATTTGCTCTGTTATACTCAATGGACGAGGTAGTA
GTAGATCCAGCCATCACTATCAAAGCTATTGGGCATCAATGGTATTGGAC
TTATGAGTATTCAGACTATAACAGTTCCGATGAACAGTCACTCATTTTTG
ACAGTTATATGATTCCAGAGGATGATCTAGAATTGGGTCAATTACGTTTA
TTANNNGTGG
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